LIVIA PERFETTO

Researcher

email: livia.perfetto@uniroma1.it
phone:
building: via dei Sardi 70


NAME: Livia Perfetto

POSITION TITLE: Researcher and Assistant Professor at University of Rome, La Sapienza, Italy

EDUCATION/TRAINING

University of Rome Tor Vergata, Rome, Italy BS 07/2007 Cellular and Molecular Biology
University of Rome Tor Vergata, Rome, Italy MS 03/2009 Cellular and Molecular Biology
University of Rome Tor Vergata, Rome, Italy PhD 04/2015 Cellular and Molecular Biology
University of Rome Tor Vergata and Fondazione GIMEMA, Rome, Italy MS 02/2017 Clinical research in hematology
University of Rome Tor Vergata, Rome, Italy Post-Doctoral 12/2015 Bioinformatics
University of Rome Tor Vergata, Rome, Italy Post-Doctoral 12/2017 Bioinformatics
European Bioinformatic Institute, EMBL-EBI, Cambridge, UK Post-Doctoral 10/2020 Bioinformatics
Fondazione Human Technopole, Milan, Italy Post-Doctoral 10/2022 Bioinformatics


A. Personal Statement

In approximately 15 years of experience gained in different prestigious institutes, such as EMBL-EBI and Fondazione Human Technopole, I have acquired extensive knowledge and experience in network analysis, multi-omics data integration, personalized medicine, machine learning and database development and maintenance. The group I coordinate, albeit small, is motivated, enthusiastic and characterized by interdisciplinarity. The group benefits of a close collaboration between members of the SIGNOR database and a bioinformatics unit, within a collaboration between University of Rome La Sapienza, University of Rome Tor Vergata and Fondazione Human Technopole. Over the last years I’ve successfully administered different projects, established solid and long-term international collaborations and produced several peer-reviewed publications.

From the beginning of my research I have focused on Biological Networks and on the functional insights we can gain from the analysis of physical and causal relationships between proteins. As detailed in the accompanying published manuscripts (see ‘Contribution to Science’), I have contributed to this general goal by looking at it from several angles. The observation that Network-based approaches to human diseases have multiple potential biological and clinical applications has offered me the opportunity to move to a more translational field.




B. Positions, Scientific Appointments, and Honors
Positions
2022-Present, University of Rome La Sapienza, Rome (Italy), Researcher and Assistant Professor
2021-Present, University of Cambridge, Visitor Scientist
2020-2022, Fondazione Human Technopole, Milan (Italy), Scientific Consultant and SIGNOR project coordinator
2020-2022, European Bioinformatic Institute (EMBL-EBI), Cambridge (UK), Visitor Scientist
2017-2020, European Bioinformatic Institute (EMBL-EBI), Cambridge (UK), Staff member (senior curator and bioinformatician)
2016-2017, University of Rome ‘Tor Vergata’, Rome (Italy), Post-doc (AIRC personal fellowship GRANT)
2014-2016, University of Rome ‘Tor Vergata’ Rome (Italy), Post-doc

Editorial appointments
2022-Present, ‘Frontiers in Bioinformatics’ Editorial Board, Research Topic Editor for the special issue “Approaches to modelling complex biological systems”
2021-Present, ‘Frontiers in Bioinformatics’ Editorial Board, Review Editor

Memberships
2022-Present, Member of the Elixir Systems Biology Focus Group.
2020-Present, Member of the VarioPath consortium
2020-Present, Member of the Disease map project
2017 Member, of the ISB (International Society of Biocuration)
2016-2022, Member of the GREEKC consortium (COST action CA15205)
2010-Present, Member of the HUPO-PSI (Proteomic Standard Initiative) community
2010-Present, Member of the IMEx consortium

Grants
2023. Awarded a My First AIRC Grant
2023. Awarded a PRIN PNRR Grant
2022. Awarded a University of Rome, La Sapienza Seed GRANT
2016. Awarded a COST action grant (within the COST Action CA15205) to organize the GREEKC Action Planning Meeting, Core Group Meeting.
2015. Awarded a triennial fellowship Starwood Hotels & Resorts (AIRC grant) selected on a peer-review basis
2011. Awarded a FEBS Youth Travel grant
2010, Awarded 5000 € Special Prize ‘Sebastiano and Rita Raeli’ as best student of the year.

Research products

11573/1718956 - 2024 - Unveiling the signaling network of FLT3-ITD AML improves drug sensitivity prediction
Latini, Sara; Venafra, Veronica; Massacci, Giorgia; Bica, Valeria; Graziosi, Simone; Pugliese, Giusj Monia; Iannuccelli, Marta; Frioni, Filippo; Minnella, Gessica; Marra, John Donald; Chiusolo, Patrizia; Pepe, Gerardo; Helmer Citterich, Manuela; Mougiakakos, Dimitros; Böttcher, Martin; Fischer, Thomas; Perfetto, Livia; Sacco, Francesca - 01a Articolo in rivista
paper: ELIFE (Cambridge: eLife Sciences Publications) pp. - - issn: 2050-084X - wos: WOS:001196100200001 (0) - scopus: 2-s2.0-85189825849 (0)

11573/1718955 - 2024 - Stage-dependent phosphoproteome remodeling of Parkinson's disease blood cells
Massacci, Giorgia; Venafra, Veronica; Zwiebel, Maximilian; Wahle, Maria; Cerroni, Rocco; Bissacco, Jacopo; Perfetto, Livia; Michienzi, Vito; Stefani, Alessandro; Mercuri, Nicola Biagio; Schirinzi, Tommaso; Sacco, Francesca - 01a Articolo in rivista
paper: NEUROBIOLOGY OF DISEASE ([Oxford] : Blackwell Science) pp. - - issn: 1095-953X - wos: WOS:001290813100001 (0) - scopus: 2-s2.0-85200327069 (0)

11573/1718954 - 2024 - SignalingProfiler 2.0 a network-based approach to bridge multi-omics data to phenotypic hallmarks
Venafra, Veronica; Sacco, Francesca; Perfetto, Livia - 01a Articolo in rivista
paper: NPJ SYSTEMS BIOLOGY AND APPLICATIONS (London : Nature Partner Journals) pp. - - issn: 2056-7189 - wos: WOS:001297110900001 (0) - scopus: 2-s2.0-85201936917 (0)

11573/1697213 - 2023 - Curation of causal interactions mediated by genes associated with autism accelerates the understanding of gene-phenotype relationships underlying neurodevelopmental disorders
Iannuccelli, Marta; Vitriolo, Alessandro; Licata, Luana; Lo Surdo, Prisca; Contino, Silvia; Cheroni, Cristina; Capocefalo, Daniele; Castagnoli, Luisa; Testa, Giuseppe; Cesareni, Gianni; Perfetto, Livia - 01a Articolo in rivista
paper: MOLECULAR PSYCHIATRY (Basingstoke: Nature Publishing Group.) pp. - - issn: 1476-5578 - wos: WOS:001129526200005 (1) - scopus: 2-s2.0-85179653018 (1)

11573/1697214 - 2023 - The Cyclin-dependent kinase 1: more than a cell cycle regulator
Massacci, Giorgia; Perfetto, Livia; Sacco, Francesca - 01g Articolo di rassegna (Review)
paper: BRITISH JOURNAL OF CANCER (Houndmills Basingstoke Hampshire: Nature Pub. Group London: Harcourt Publishers.) pp. 1707-1716 - issn: 1532-1827 - wos: WOS:001099067900002 (17) - scopus: 2-s2.0-85175088850 (15)

11573/1718957 - 2023 - Drug-target identification in COVID-19 disease mechanisms using computational systems biology approaches
Niarakis, Anna; Ostaszewski, Marek; Mazein, Alexander; Kuperstein, Inna; Kutmon, Martina; Gillespie, Marc E; Funahashi, Akira; Acencio, Marcio Luis; Hemedan, Ahmed; Aichem, Michael; Klein, Karsten; Czauderna, Tobias; Burtscher, Felicia; Yamada, Takahiro G; Hiki, Yusuke; Hiroi, Noriko F; Hu, Finterly; Pham, Nhung; Ehrhart, Friederike; Willighagen, Egon L; Valdeolivas, Alberto; Dugourd, Aurelien; Messina, Francesco; Esteban-Medina, Marina; Peña-Chilet, Maria; Rian, Kinza; Soliman, Sylvain; Aghamiri, Sara Sadat; Puniya, Bhanwar Lal; Naldi, Aurélien; Helikar, Tomáš; Singh, Vidisha; Fernández, Marco Fariñas; Bermudez, Viviam; Tsirvouli, Eirini; Montagud, Arnau; Noël, Vincent; Ponce-De-Leon, Miguel; Maier, Dieter; Bauch, Angela; Gyori, Benjamin M; Bachman, John A; Luna, Augustin; Piñero, Janet; Furlong, Laura I; Balaur, Irina; Rougny, Adrien; Jarosz, Yohan; Overall, Rupert W; Phair, Robert; Perfetto, Livia; Matthews, Lisa; Rex, Devasahayam Arokia Balaya; Orlic-Milacic, Marija; Gomez, Luis Cristobal Monraz; De Meulder, Bertrand; Ravel, Jean Marie; Jassal, Bijay; Satagopam, Venkata; Wu, Guanming; Golebiewski, Martin; Gawron, Piotr; Calzone, Laurence; Beckmann, Jacques S; Evelo, Chris T; D'eustachio, Peter; Schreiber, Falk; Saez-Rodriguez, Julio; Dopazo, Joaquin; Kuiper, Martin; Valencia, Alfonso; Wolkenhauer, Olaf; Kitano, Hiroaki; Barillot, Emmanuel; Auffray, Charles; Balling, Rudi; Schneider, Reinhard - 01a Articolo in rivista
paper: FRONTIERS IN IMMUNOLOGY (Lausanne : Frontiers Research Foundation, 2010-) pp. 1-24 - issn: 1664-3224 - wos: (0) - scopus: 2-s2.0-85185923805 (0)

11573/1680075 - 2023 - Impact of FLT3-ITD location on cytarabine sensitivity in AML: a network-based approach
Pugliese, Giusj Monia; Venafra, Veronica; Bica, Valeria; Massacci, Giorgia; Latini, Sara; Graziosi, Simone; Fischer, Thomas; Mougiakakos, Dimitrios; Boettcher, Martin; Perfetto, Livia; Sacco, Francesca - 01a Articolo in rivista
paper: LEUKEMIA (First or current publisher [Houndmills, Basingstoke, Hampshire, UK] : Stockton Press Current or last publisher London : Nature Publishing Group) pp. 1151-1155 - issn: 1476-5551 - wos: WOS:000952382300001 (3) - scopus: 2-s2.0-85150617778 (3)

11573/1697215 - 2023 - The landscape of microRNA interaction annotation: analysis of three rare disorders as a case study
Simona, Panni; Panneerselvam, Kalpana; Porras, Pablo; Duesbury, Margaret; Perfetto, Livia; Licata, Luana; Hermjakob, Henning; Orchard, Sandra - 01a Articolo in rivista
paper: DATABASE (Oxford: Oxford Journals, 2009- Oxford,UK: Oxford University Press) pp. 1-10 - issn: 1758-0463 - wos: WOS:001081606800001 (0) - scopus: 2-s2.0-85175741233 (0)

11573/1697212 - 2023 - The effects of pathogenic and likely pathogenic variants for inherited hemostasis disorders in 140 214 UK Biobank participants
Stefanucci, L.; Collins, J.; Sims, M. C.; Barrio-Hernandez, I.; Sun, L.; Burren, O. S.; Perfetto, L.; Bender, I.; Callahan, T. J.; Fleming, K.; Guerrero, J. A.; Hermjakob, H.; Martin, M. J.; Stephenson, J.; Paneerselvam, K.; Petrovski, S.; Porras, P.; Robinson, P. N.; Wang, Q.; Watkins, X.; Frontini, M.; Laskowski, R. A.; Beltrao, P.; Di Angelantonio, E.; Gomez, K.; Laffan, M.; Ouwehand, W. H.; Mumford, A. D.; Freson, K.; Carss, K.; Downes, K.; Gleadall, N.; Megy, K.; Bruford, E.; Vuckovic, D. - 01a Articolo in rivista
paper: BLOOD (New York: Elsevier Inc. [Washington DC etc.]: American Society of Hematology) pp. 2055-2068 - issn: 0006-4971 - wos: WOS:001146299800001 (5) - scopus: 2-s2.0-85173962334 (7)

11573/1660183 - 2022 - SIGNORApp: a Cytoscape 3 application to access SIGNOR data
De Marinis, I; Lo Surdo, P; Cesareni, G; Perfetto, L - 01a Articolo in rivista
paper: BIOINFORMATICS (-Oxford : Oxford University Press, 1998-) pp. 1764-1766 - issn: 1367-4803 - wos: WOS:000756727100001 (8) - scopus: 2-s2.0-85126590934 (6)

11573/1660185 - 2022 - The IntAct database: efficient access to fine-grained molecular interaction data
Del Toro, N; Shrivastava, A; Ragueneau, E; Meldal, B; Combe, C; Barrera, E; Perfetto, L; How, K; Ratan, P; Shirodkar, G; Lu, O; Meszaros, B; Watkins, X; Pundir, S; Licata, L; Iannuccelli, M; Pellegrini, M; Martin, Mj; Panni, S; Duesbury, M; Vallet, Sd; Rappsilber, J; Ricard-Blum, S; Cesareni, G; Salwinski, L; Orchard, S; Porras, P; Panneerselvam, K; Hermjakob, H - 01a Articolo in rivista
paper: NUCLEIC ACIDS RESEARCH (Oxford University Press:Journals Department, Great Clarendon Street, Oxford OX2 6DP United Kingdom:011 44 1865 556767, EMAIL: jnlorders@oup.co.uk, INTERNET: http://www.oup.co.uk, Fax: 011 44 1865 267485 Editore precedente: Information Retrieval ltd., London) pp. 648-653 - issn: 0305-1048 - wos: WOS:000743496700078 (112) - scopus: 2-s2.0-85123044845 (119)

11573/1660181 - 2022 - A resource to infer molecular paths linking cancer mutations to perturbation of cell metabolism
Iannuccelli, M; Lo Surdo, P; Licata, L; Castagnoli, L; Cesareni, G; Perfetto, L - 01a Articolo in rivista
paper: FRONTIERS IN MOLECULAR BIOSCIENCES (Lausanne : Frontiers Media S.A., 2014-) pp. - - issn: 2296-889X - wos: WOS:000805011900001 (2) - scopus: 2-s2.0-85131520980 (2)

11573/1660175 - 2022 - The gene regulation knowledge commons: the action area of GREEKC
Kuiper, M; Bonello, J; Fernandez-Breis, Jt; Bucher, P; Futschik, Me; Gaudet, P; Kulakovskiy, Iv; Licata, L; Logie, C; Lovering, Rc; Makeev, Vj; Orchard, S; Panni, S; Perfetto, L; Sant, D; Schulz, S; Vercruysse, S; Zerbino, Dr; Laegreid, A - 01a Articolo in rivista
paper: BIOCHIMICA ET BIOPHYSICA ACTA. GENE REGULATORY MECHANISMS (Amsterdam-UK : Elsevier) pp. - - issn: 1874-9399 - wos: WOS:000727751500001 (3) - scopus: 2-s2.0-85120502486 (4)

11573/1664850 - 2022 - SIGNOR 3.0, the SIGnaling network open resource 3.0: 2022 update
Lo Surdo, Prisca; Iannuccelli, Marta; Contino, Silvia; Castagnoli, Luisa; Licata, Luana; Cesareni, Gianni; Perfetto, Livia - 01a Articolo in rivista
paper: NUCLEIC ACIDS RESEARCH (Oxford University Press:Journals Department, Great Clarendon Street, Oxford OX2 6DP United Kingdom:011 44 1865 556767, EMAIL: jnlorders@oup.co.uk, INTERNET: http://www.oup.co.uk, Fax: 011 44 1865 267485 Editore precedente: Information Retrieval ltd., London) pp. - - issn: 0305-1048 - wos: WOS:000868392800001 (35) - scopus: 2-s2.0-85159634044 (36)

11573/1664849 - 2022 - A key role of the WEE1-CDK1 axis in mediating TKI-therapy resistance in FLT3-ITD positive acute myeloid leukemia patients
Massacci, Giorgia; Venafra, Veronica; Latini, Sara; Bica, Valeria; Pugliese, Giusj Monia; Graziosi, Simone; Klingelhuber, Felix; Krahmer, Natalie; Fischer, Thomas; Mougiakakos, Dimitrios; Boettcher, Martin; Perfetto, Livia; Sacco, Francesca - 01a Articolo in rivista
paper: LEUKEMIA (First or current publisher [Houndmills, Basingstoke, Hampshire, UK] : Stockton Press Current or last publisher London : Nature Publishing Group) pp. - - issn: 1476-5551 - wos: WOS:000898331300001 (7) - scopus: 2-s2.0-85143763800 (6)

11573/1660178 - 2022 - Complex Portal 2022: new curation frontiers
Meldal, Bhm; Perfetto, L; Combe, C; Lubiana, T; Cavalcante, Jvf; Bye-A-Jee, H; Waagmeester, A; Del-Toro, N; Shrivastava, A; Barrera, E; Wong, E; Mlecnik, B; Bindea, G; Panneerselvam, K; Willighagen, E; Rappsilber, J; Porras, P; Hermjakob, H; Orchard, S - 01a Articolo in rivista
paper: NUCLEIC ACIDS RESEARCH (Oxford University Press:Journals Department, Great Clarendon Street, Oxford OX2 6DP United Kingdom:011 44 1865 556767, EMAIL: jnlorders@oup.co.uk, INTERNET: http://www.oup.co.uk, Fax: 011 44 1865 267485 Editore precedente: Information Retrieval ltd., London) pp. D578-D586 - issn: 0305-1048 - wos: WOS:000743496700070 (20) - scopus: 2-s2.0-85122997981 (27)

11573/1660163 - 2021 - The Gene Ontology resource: enriching a GOld mine
Carbon, S; Douglass, E; Good, Bm; Unni, Dr; Harris, Nl; Mungall, Cj; Basu, S; Chisholm, Rl; Dodson, Rj; Hartline, E; Fey, P; Thomas, Pd; Albou, Lp; Ebert, D; Kesling, Mj; Mi, Hy; Muruganujan, A; Huang, Xs; Mushayahama, T; Labonte, Sa; Siegele, Da; Antonazzo, G; Attrill, H; Brown, Nh; Garapati, P; Marygold, Sj; Trovisco, V; Dos Santos, G; Falls, K; Tabone, C; Zhou, Pl; Goodman, Jl; Strelets, Vb; Thurmond, J; Garmiri, P; Ishtiaq, R; Rodriguez-Lopez, M; Acencio, Ml; Kuiper, M; Laegreid, A; Logie, C; Lovering, Rc; Kramarz, B; Saverimuttu, Scc; Pinheiro, Sm; Gunn, H; Su, Rz; Thurlow, Ke; Chibucos, M; Giglio, M; Nadendla, S; Munro, J; Jackson, R; Duesbury, Mj; Del-Toro, N; Meldal, Bhm; Paneerselvam, K; Perfetto, L; Porras, P; Orchard, S; Shrivastava, A; Chang, Hy; Finn, Rd; Mitchell, Al; Rawlings, Nd; Richardson, L; Sangrador-Vegas, A; Blake, Ja; Christie, Kr; Dolan, Me; Drabkin, Hj; Hill, Dp; Ni, L; Sitnikov, Dm; Harris, Ma; Oliver, Sg; Rutherford, K; Wood, V; Hayles, J; Bahler, J; Bolton, Er; De Pons, Jl; Dwinell, Mr; Hayman, Gt; Kaldunski, Ml; Kwitek, Ae; Laulederkind, Sjf; Plasterer, C; Tutaj, Ma; Vedi, M; Wang, Sj; D'eustachio, P; Matthews, L; Balhoff, Jp; Aleksander, Sa; Alexander, Mj; Cherry, Jm; Engel, Sr; Gondwe, F; Karra, K; Miyasato, Sr; Nash, Rs; Simison, M; Skrzypek, Ms; Weng, S; Wong, Ed; Feuermann, M; Gaudet, P; Morgat, A; Bakker, E; Berardini, Tz; Reiser, L; Subramaniam, S; Huala, E; Arighi, Cn; Auchincloss, A; Axelsen, K; Argoud-Puy, G; Bateman, A; Blatter, Mc; Boutet, E; Bowler, E; Breuza, L; Bridge, A; Britto, R; Bye-A-Jee, H; Casas, Cc; Coudert, E; Denny, P; Estreicher, A; Famiglietti, Ml; Georghiou, G; Gos, A; Gruaz-Gumowski, N; Hatton-Ellis, E; Hulo, C; Ignatchenko, A; Jungo, F; Laiho, K; Le Mercier, P; Lieberherr, D; Lock, A; Lussi, Y; Macdougall, A; Magrane, M; Martin, Mj; Masson, P; Natale, Da; Hyka-Nouspikel, N; Orchard, S; Pedruzzi, I; Pourcel, L; Poux, S; Pundir, S; Rivoire, C; Speretta, E; Sundaram, S; Tyagi, N; Warner, K; Zaru, R; Wu, Ch; Diehl, Ad; Chan, Jn; Grove, C; Lee, Ryn; Muller, Hm; Raciti, D; Van Auken, K; Sternberg, Pw; Berriman, M; Paulini, M; Howe, K; Gao, S; Wright, A; Stein, L; Howe, Dg; Toro, S; Westerfield, M; Jaiswal, P; Cooper, L; Elser, J - 01a Articolo in rivista
paper: NUCLEIC ACIDS RESEARCH (Oxford University Press:Journals Department, Great Clarendon Street, Oxford OX2 6DP United Kingdom:011 44 1865 556767, EMAIL: jnlorders@oup.co.uk, INTERNET: http://www.oup.co.uk, Fax: 011 44 1865 267485 Editore precedente: Information Retrieval ltd., London) pp. 325-334 - issn: 0305-1048 - wos: WOS:000608437800042 (1933) - scopus: 2-s2.0-85099428896 (2097)

11573/1660173 - 2021 - Assembling disease networks from causal interaction resources
Cesareni, G; Sacco, F; Perfetto, L - 01g Articolo di rassegna (Review)
paper: FRONTIERS IN GENETICS (Lausanne : Frontiers Research Foundation, 2010-) pp. - - issn: 1664-8021 - wos: WOS:000665763300001 (3) - scopus: 2-s2.0-85108874484 (3)

11573/1660187 - 2021 - Analysing the yeast complexome-the Complex Portal rising to the challenge
Meldal, Bhm; Pons, C; Perfetto, L; Del-Toro, N; Wong, E; Aloy, P; Hermjakob, H; Orchard, S; Porras, P - 01a Articolo in rivista
paper: NUCLEIC ACIDS RESEARCH (Oxford University Press:Journals Department, Great Clarendon Street, Oxford OX2 6DP United Kingdom:011 44 1865 556767, EMAIL: jnlorders@oup.co.uk, INTERNET: http://www.oup.co.uk, Fax: 011 44 1865 267485 Editore precedente: Information Retrieval ltd., London) pp. 3156-3167 - issn: 0305-1048 - wos: WOS:000642330200017 (3) - scopus: 2-s2.0-85104048201 (3)

11573/1660720 - 2021 - Integrating patient-specific information into logic models of complex diseases: application to acute myeloid leukemia
Palma, Alessandro; Iannuccelli, Marta; Rozzo, Ilaria; Licata, Luana; Perfetto, Livia; Massacci, Giorgia; Castagnoli, Luisa; Cesareni, Gianni; Sacco, Francesca - 01a Articolo in rivista
paper: JOURNAL OF PERSONALIZED MEDICINE (Basel: MDPI AG, 2011-) pp. 1-15 - issn: 2075-4426 - wos: WOS:000622705700001 (3) - scopus: 2-s2.0-85101196769 (4)

11573/1660160 - 2021 - A resource for the network representation of cell perturbations caused by SARS-CoV-2 infection
Perfetto, L; Micarelli, E; Iannuccelli, M; Lo Surdo, P; Giuliani, G; Latini, S; Pugliese, Gm; Massacci, G; Vumbaca, S; Riccio, F; Fuoco, C; Paoluzi, S; Castagnoli, L; Cesareni, G; Licata, L; Sacco, F - 01a Articolo in rivista
paper: GENES (Basel : Molecular Diversity Preservation International) pp. - - issn: 2073-4425 - wos: WOS:000633658000001 (5) - scopus: 2-s2.0-85103098209 (6)

11573/1660188 - 2021 - Combining mass spectrometry-based phosphoproteomics with a network-based approach to reveal FLT3-dependent mechanisms of chemoresistance
Pugliese, Gm; Latini, S; Massacci, G; Perfetto, L; Sacco, F - 01g Articolo di rassegna (Review)
paper: PROTEOMES (Basel: MDPI) pp. - - issn: 2227-7382 - wos: WOS:000666795600001 (3) - scopus: 2-s2.0-85106693219 (3)

11573/1660177 - 2020 - A coordinated approach by public domain bioinformatics resources to aid the fight against Alzheimer's disease through expert curation of key protein targets
Breuza, L; Arighi, Cn; Argoud-Puy, G; Casals-Casas, C; Estreicher, A; Famiglietti, Ml; Georghiou, G; Gos, A; Gruaz-Gumowski, N; Hinz, U; Hyka-Nouspikel, N; Kramarz, B; Lovering, Rc; Lussi, Y; Magrane, M; Masson, P; Perfetto, L; Poux, S; Rodriguez-Lopez, M; Stoeckert, C; Sundaram, S; Wang, Ls; Wu, El; Orchard, S - 01a Articolo in rivista
paper: JOURNAL OF ALZHEIMER'S DISEASE (Netherlands: IOS Press) pp. 257-273 - issn: 1387-2877 - wos: WOS:000568816600021 (4) - scopus: 2-s2.0-85090506903 (4)

11573/1660170 - 2020 - CancerGeneNet: linking driver genes to cancer hallmarks
Iannuccelli, M; Micarelli, E; Lo Surdo, P; Palma, A; Perfetto, L; Rozzo, I; Castagnoli, L; Licata, L; Cesareni, G - 01a Articolo in rivista
paper: NUCLEIC ACIDS RESEARCH (Oxford University Press:Journals Department, Great Clarendon Street, Oxford OX2 6DP United Kingdom:011 44 1865 556767, EMAIL: jnlorders@oup.co.uk, INTERNET: http://www.oup.co.uk, Fax: 011 44 1865 267485 Editore precedente: Information Retrieval ltd., London) pp. 416-421 - issn: 0305-1048 - wos: WOS:000525956700058 (28) - scopus: 2-s2.0-85077665376 (29)

11573/1660179 - 2020 - SIGNOR 2.0, the SIGnaling Network Open Resource 2.0: 2019 update
Licata, L; Lo Surdo, P; Iannuccelli, M; Palma, A; Micarelli, E; Perfetto, L; Peluso, D; Calderone, A; Castagnoli, L; Cesareni, G - 01a Articolo in rivista
paper: NUCLEIC ACIDS RESEARCH (Oxford University Press:Journals Department, Great Clarendon Street, Oxford OX2 6DP United Kingdom:011 44 1865 556767, EMAIL: jnlorders@oup.co.uk, INTERNET: http://www.oup.co.uk, Fax: 011 44 1865 267485 Editore precedente: Information Retrieval ltd., London) pp. 504-510 - issn: 0305-1048 - wos: WOS:000525956700070 (156) - scopus: 2-s2.0-85077669355 (174)

11573/1660715 - 2020 - The IMEx coronavirus interactome: an evolving map of Coronaviridae-host molecular interactions
Perfetto, L; Pastrello, C; Del-Toro, N; Duesbury, M; Iannuccelli, M; Kotlyar, M; Licata, L; Meldal, B; Panneerselvam, K; Panni, S; Rahimzadeh, N; Ricard-Blum, S; Salwinski, L; Shrivastava, A; Cesareni, G; Pellegrini, M; Orchard, S; Jurisica, I; Hermjakob, H; Porras, P - 01a Articolo in rivista
paper: DATABASE (Oxford: Oxford Journals, 2009- Oxford,UK: Oxford University Press) pp. - - issn: 1758-0463 - wos: WOS:000597233700001 (23) - scopus: 2-s2.0-85096407251 (27)

11573/1660171 - 2020 - Towards a unified open access dataset of molecular interactions
Porras, P; Barrera, E; Bridge, A; Del-Toro, N; Cesareni, G; Duesbury, M; Hermjakob, H; Iannuccelli, M; Jurisica, I; Kotlyar, M; Licata, L; Lovering, Rc; Lynn, Dj; Meldal, B; Nanduri, B; Paneerselvam, K; Panni, S; Pastrello, C; Pellegrini, M; Perfetto, L; Rahimzadeh, N; Ratan, P; Ricard-Blum, S; Salwinski, L; Shirodkar, G; Shrivastava, A; Orchard, S - 01a Articolo in rivista
paper: NATURE COMMUNICATIONS (London: Nature Publishing Group-Springer Nature) pp. - - issn: 2041-1723 - wos: WOS:000598900500001 (39) - scopus: 2-s2.0-85097001859 (44)

11573/1660168 - 2020 - The minimum information about a molecular interaction CAusal STatement (MI2CAST)
Toure, V; Vercruysse, S; Acencio, Ml; Lovering, Rc; Orchard, S; Bradley, G; Casals-Casas, C; Chaouiya, C; Del-Toro, N; Flobak, A; Gaudet, P; Hermjakob, H; Hoyt, Ct; Licata, L; Laegreid, A; Mungall, Cj; Niknejad, A; Panni, S; Perfetto, L; Porras, P; Pratt, D; Saez-Rodriguez, J; Thieffry, D; Thomas, Pd; Turei, D; Kuiper, M - 01a Articolo in rivista
paper: BIOINFORMATICS (-Oxford : Oxford University Press, 1998-) pp. 5712-5718 - issn: 1367-4803 - wos: WOS:000642297800023 (8) - scopus: 2-s2.0-85094135160 (11)

11573/1660164 - 2019 - Assessment of network module identification across complex diseases
Choobdar, S; Ahsen, Me; Crawford, J; Tomasoni, M; Fang, T; Lamparter, D; Lin, Jy; Hescott, B; Hu, Xz; Mercer, J; Natoli, T; Narayan, R; Aicheler, F; Amoroso, N; Arenas, A; Azhagesan, K; Baker, A; Banf, M; Batzoglou, S; Baudot, A; Bellotti, R; Bergmann, S; Boroevich, Ka; Brun, C; Cai, S; Caldera, M; Calderone, A; Cesareni, G; Chen, Wq; Chichester, C; Cowen, L; Cui, Hz; Dao, P; De Domenico, M; Dhroso, A; Didier, G; Divine, M; Del Sol, A; Feng, Xy; Flores-Canales, Jc; Fortunato, S; Gitter, A; Gorska, A; Guan, Yf; Guenoche, A; Gomez, S; Hamza, H; Hartmann, A; He, S; Heijs, A; Heinrich, J; Hu, Y; Huang, Xq; Hughitt, Vk; Jeon, M; Jeub, L; Johnson, Nt; Joo, K; Joung, I; Jung, S; Kalko, Sg; Kamola, Pj; Kang, J; Kaveelerdpotjana, B; Kim, M; Kim, Ya; Kohlbacher, O; Korkin, D; Krzysztof, K; Kunji, K; Kutalik, Z; Lage, K; Lang-Brown, S; Le, Td; Lee, J; Lee, S; Lee, J; Li, D; Li, Jy; Liu, L; Loizou, A; Luo, Zh; Lysenko, A; Ma, Tl; Mall, R; Marbach, D; Mattia, T; Medvedovic, M; Menche, J; Micarelli, E; Monaco, A; Mueller, F; Narykov, O; Norman, T; Park, S; Perfetto, L; Perrin, D; Pirro, S; Przytycka, Tm; Qian, Xn; Raman, K; Ramazzotti, D; Ramsahai, E; Ravindran, B; Rennert, P; Saez-Rodriguez, J; Scharfe, C; Sharan, R; Shi, N; Shin, W; Shu, H; Sinha, H; Slonim, Dk; Spinelli, L; Srinivasan, S; Subramanian, A; Suver, C; Szklarczyk, D; Tangaro, S; Thiagarajan, S; Tichit, L; Tiede, T; Tripathi, B; Tsherniak, A; Tsunoda, T; Turei, D; Ullah, E; Vahedi, G; Valdeolivas, A; Vivek, J; Von Mering, C; Waagmeester, A; Wang, B; Wang, Yj; Weir, Ba; White, S; Winkler, S; Xu, K; Xu, Ts; Yan, Ch; Yang, Lq; Yu, Kx; Yu, Xt; Zaffaroni, G; Zaslavskiy, M; Zeng, T; Zhang, Jtd; Zhang, L; Zhang, Wj; Zhang, L; Zhang, Xy; Zhang, Jp; Zhou, X; Zhou, Jr; Zhu, Ht; Zhu, Jj; Zuccon, G; Stolovitzky, G; Kutalik, Z; Lage, K; Slonim, Dk; Saez-Rodriguez, J; Cowen, Lj; Bergmann, S; Marbach, D - 01a Articolo in rivista
paper: NATURE METHODS (New York, NY : Nature Pub. Group, c2004-) pp. 843-852 - issn: 1548-7091 - wos: WOS:000484044700022 (170) - scopus: 2-s2.0-85071733655 (176)

11573/1660717 - 2019 - Capturing variation impact on molecular interactions in the IMEx Consortium mutations data set
Del-Toro, N; Duesbury, M; Koch, M; Perfetto, L; Shrivastava, A; Ochoa, D; Wagih, O; Piñero, J; Kotlyar, M; Pastrello, C; Beltrao, P; Furlong, L I; Jurisica, I; Hermjakob, H; Orchard, S; Porras, P - 01a Articolo in rivista
paper: NATURE COMMUNICATIONS (London: Nature Publishing Group-Springer Nature) pp. - - issn: 2041-1723 - wos: WOS:000454679900010 (40) - scopus: 2-s2.0-85059496699 (59)

11573/1660155 - 2019 - Complex Portal 2018: extended content and enhanced visualization tools for macromolecular complexes
Meldal, Bhm; Bye-A-Jee, H; Gajdos, L; Hammerova, Z; Horackova, A; Melicher, F; Perfetto, L; Pokorny, D; Lopez, Mr; Turkova, A; Wong, Ed; Xie, Zy; Casanova, Eb; Del-Toro, N; Koch, M; Porras, P; Hermjakob, H; Orchard, S - 01a Articolo in rivista
paper: NUCLEIC ACIDS RESEARCH (Oxford University Press:Journals Department, Great Clarendon Street, Oxford OX2 6DP United Kingdom:011 44 1865 556767, EMAIL: jnlorders@oup.co.uk, INTERNET: http://www.oup.co.uk, Fax: 011 44 1865 267485 Editore precedente: Information Retrieval ltd., London) pp. 550-558 - issn: 0305-1048 - wos: WOS:000462587400077 (73) - scopus: 2-s2.0-85058482763 (79)

11573/1660182 - 2019 - Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen
Menden, Mp; Wang, D; Mason, Mj; Szalai, B; Bulusu, Kc; Guan, Yf; Yu, T; Kang, J; Jeon, M; Wolfinger, R; Nguyen, T; Zaslavskiy, M; Jang, Is; Ghazoui, Z; Ahsen, Me; Vogel, R; Neto, Ec; Norman, T; Tang, Eky; Garnett, Mj; Di Veroli, Gy; Fawell, S; Stolovitzky, G; Guinney, J; Dry, Jr; Saez-Rodriguez, J; Abante, J; Abecassis, Bs; Aben, N; Aghamirzaie, D; Aittokallio, T; Akhtari, Fs; Al-Lazikani, B; Alam, T; Allam, A; Allen, C; De Almeida, Mp; Altarawy, D; Alves, V; Amadoz, A; Anchang, B; Antolin, Aa; Ash, Jr; Aznar, Vr; Ba-Alawi, W; Bagheri, M; Bajic, V; Ball, G; Ballester, Pj; Baptista, D; Bare, C; Bateson, M; Bender, A; Bertrand, D; Wijayawardena, B; Boroevich, Ka; Bosdriesz, E; Bougouffa, S; Bounova, G; Brouwer, T; Bryant, B; Calaza, M; Calderone, A; Calza, S; Capuzzi, S; Carbonell-Caballero, J; Carlin, D; Carter, H; Castagnoli, L; Celebi, R; Cesareni, G; Chang, H; Chen, Gc; Chen, Hr; Chen, Hy; Cheng, Lj; Chernomoretz, A; Chicco, D; Cho, Kh; Cho, S; Choi, D; Choi, J; Choi, K; Choi, M; De Cock, M; Coker, E; Cortes-Ciriano, I; Cserzo, M; Cubuk, C; Curtis, C; Van Daele, D; Dang, Cc; Dijkstra, T; Dopazo, J; Draghici, S; Drosou, A; Dumontier, M; Ehrhart, F; Eid, Fe; Elhefnawi, M; Elmarakeby, H; Van Engelen, B; Engin, Hb; De Esch, I; Evelo, C; Falcao, Ao; Farag, S; Fernandez-Lozano, C; Fisch, K; Flobak, A; Fornari, C; Foroushani, Abk; Fotso, Dc; Fourches, D; Friend, S; Frigessi, A; Gao, F; Gao, Xt; Gerold, Jm; Gestraud, P; Ghosh, S; Gillberg, J; Godoy-Lorite, A; Godynyuk, L; Godzik, A; Goldenberg, A; Gomez-Cabrero, D; Gonen, M; De Graaf, C; Gray, H; Grechkin, M; Guimera, R; Guney, E; Haibe-Kains, B; Han, Y; Hase, T; He, D; He, Ly; Heath, Ls; Hellton, Kh; Helmer-Citterich, M; Hidalgo, Mr; Hidru, D; Hill, Sm; Hochreiter, S; Hong, S; Hovig, E; Hsueh, Yc; Hu, Zy; Huang, Jk; Huang, Rs; Hunyady, L; Hwang, J; Hwang, Th; Hwang, W; Hwang, Y; Isayev, O; Walk, Obd; Jack, J; Jahandideh, S; Ji, Jd; Jo, Y; Kamola, Pj; Kanev, Gk; Karacosta, L; Karimi, M; Kaski, S; Kazanov, M; Khamis, Am; Khan, Sa; Kiani, Na; Kim, A; Kim, J; Kim, J; Kim, K; Kim, K; Kim, S; Kim, Y; Kim, Y; Kirk, Pdw; Kitano, H; Klambauer, G; Knowles, D; Ko, M; Kohn-Luque, A; Kooistra, Aj; Kuenemann, Ma; Kuiper, M; Kurz, C; Kwon, M; Van Laarhoven, T; Laegreid, A; Lederer, S; Lee, H; Lee, J; Lee, Yw; Leppaho, E; Lewis, R; Li, J; Li, L; Liley, J; Lim, Wk; Lin, C; Liu, Yy; Lopez, Y; Low, J; Lysenko, A; Machado, D; Madhukar, N; De Maeyer, D; Malpartida, Ab; Mamitsuka, H; Marabita, F; Marchal, K; Marttinen, P; Mason, D; Mazaheri, A; Mehmood, A; Mehreen, A; Michaut, M; Miller, Ra; Mitsopoulos, C; Modos, D; Van Moerbeke, M; Moo, K; Motsinger-Reif, A; Movva, R; Muraru, S; Muratov, E; Mushthofa, M; Nagarajan, N; Nakken, S; Nath, A; Neuvial, P; Newton, R; Ning, Z; De Niz, C; Oliva, B; Olsen, C; Palmeri, A; Panesar, B; Papadopoulos, S; Park, J; Park, S; Park, S; Pawitan, Y; Peluso, D; Pendyala, S; Peng, J; Perfetto, L; Pirro, S; Plevritis, S; Politi, R; Poon, H; Porta, E; Prellner, I; Preuer, K; Pujana, Ma; Ramnarine, R; Reid, Je; Reyal, F; Richardson, S; Ricketts, C; Rieswijk, L; Rocha, M; Rodriguez-Gonzalvez, C; Roell, K; Rotroff, D; De Ruiter, Jr; Rukawa, P; Sadacca, B; Safikhani, Z; Safitri, F; Sales-Pardo, M; Sauer, S; Schlichting, M; Seoane, Ja; Serra, J; Shang, Mm; Sharma, A; Sharma, H; Shen, Y; Shiga, M; Shin, M; Shkedy, Z; Shopsowitz, K; Sinai, S; Skola, D; Smirnov, P; Soerensen, If; Soerensen, P; Song, Jh; Song, So; Soufan, O; Spitzmueller, A; Steipe, B; Suphavilai, C; Tamayo, Sp; Tamborero, D; Tang, J; Tanoli, Zur; Tarres-Deulofeu, M; Tegner, J; Thommesen, L; Tonekaboni, Sam; Tran, H; De Troyer, E; Truong, A; Tsunoda, T; Turu, G; Tzeng, Gy; Verbeke, L; Videla, S; Vis, D; Voronkov, A; Votis, K; Wang, A; Wang, Hqh; Wang, Pw; Wang, S; Wang, W; Wang, Xc; Wang, X; Wennerberg, K; Wernisch, L; Wessels, L; Van Westen, Gjp; Westerman, Ba; White, Sr; Willighagen, E; Wurdinger, T; Xie, L; Xie, Sl; Xu, H; Yadav, B; Yau, C; Yeerna, H; Yin, Jw; Yu, M; Yu, M; Yun, Sj; Zakharov, A; Zamichos, A; Zanin, - 01a Articolo in rivista
paper: NATURE COMMUNICATIONS (London: Nature Publishing Group-Springer Nature) pp. - - issn: 2041-1723 - wos: WOS:000471758500010 (196) - scopus: 2-s2.0-85067453487 (219)

11573/1660184 - 2019 - Myo-REG: a portal for signaling interactions in muscle regeneration
Palma, A; Perpetuini, Ac; Ferrentino, F; Fuoco, C; Gargioli, C; Giuliani, G; Iannuccelli, M; Licata, L; Micarelli, E; Paoluzi, S; Perfetto, L; Petrilli, Ll; Reggio, A; Rosina, M; Sacco, F; Vumbaca, S; Zuccotti, A; Castagnoli, L; Cesareni, G - 01a Articolo in rivista
paper: FRONTIERS IN PHYSIOLOGY (Lausanne: Frontiers Research Foundation, 2010-) pp. - - issn: 1664-042X - wos: WOS:000488077300001 (7) - scopus: 2-s2.0-85073006415 (6)

11573/1660718 - 2019 - CausalTAB: the PSI-MITAB 2.8 updated format for signalling data representation and dissemination
Perfetto, L; Acencio, M L; Bradley, G; Cesareni, G; Del Toro, N; Fazekas, D; Hermjakob, H; Korcsmaros, T; Kuiper, M; Lægreid, A; Lo Surdo, P; Lovering, R C; Orchard, S; Porras, P; Thomas, P D; Touré, V; Zobolas, J; Licata, L - 01a Articolo in rivista
paper: BIOINFORMATICS ([Oxford] : Oxford University Press) pp. 3779-3785 - issn: 1367-4811 - wos: WOS:000499322300029 (20) - scopus: 2-s2.0-85072698050 (23)

11573/1660157 - 2019 - Integration of macromolecular complex data into the Saccharomyces Genome Database
Wong, Ed; Skrzypek, Ms; Weng, S; Binkley, G; Meldal, Bhm; Perfetto, L; Orchard, Se; Engel, Sr; Cherry, Jm - 01a Articolo in rivista
paper: DATABASE (Oxford: Oxford Journals, 2009- Oxford,UK: Oxford University Press) pp. 1-5 - issn: 1758-0463 - wos: WOS:000469873700001 (7) - scopus: 2-s2.0-85061055622 (7)

11573/1660162 - 2018 - DISNOR: a disease network open resource
Lo Surdo, P; Calderone, A; Iannuccelli, M; Licata, L; Peluso, D; Castagnoli, L; Cesareni, G; Perfetto, L - 01a Articolo in rivista
paper: NUCLEIC ACIDS RESEARCH (Oxford : Oxford University Press) pp. 527-534 - issn: 1362-4962 - wos: WOS:000419550700081 (28) - scopus: 2-s2.0-85040932140 (33)

11573/1660161 - 2018 - Combining phosphoproteomics datasets and literature information to reveal the functional connections in a cell phosphorylation network
Sacco, F; Perfetto, L; Cesareni, G - 01g Articolo di rassegna (Review)
paper: PROTEOMICS (Weinheim : Wiley-VCH-Verl.) pp. - - issn: 1615-9861 - wos: WOS:000428343700003 (16) - scopus: 2-s2.0-85044424675 (18)

11573/1660169 - 2017 - SIGNOR: A Database of Causal Relationships Between Biological Entities-A Short Guide to Searching and Browsing
Lo Surdo, P; Calderone, A; Cesareni, G; Perfetto, L - 01a Articolo in rivista
paper: CURRENT PROTOCOLS IN BIOINFORMATICS (New York : Wiley, c2003-) pp. - - issn: 1934-3396 - wos: (0) - scopus: 2-s2.0-85029438175 (8)

11573/1660172 - 2016 - SIGNOR: a database of causal relationships between biological entities
Perfetto, L; Briganti, L; Calderone, A; Perpetuini, Ac; Iannuccelli, M; Langone, F; Licata, L; Marinkovic, M; Mattioni, A; Pavlidou, T; Peluso, D; Petrilli, Ll; Pirrò, S; Posca, D; Santonico, E; Silvestri, A; Spada, F; Castagnoli, L; Cesareni, G. - 01a Articolo in rivista
paper: NUCLEIC ACIDS RESEARCH (Oxford : Oxford University Press) pp. 548-554 - issn: 1362-4962 - wos: WOS:000371261700076 (163) - scopus: 2-s2.0-84976871607 (180)

11573/1660166 - 2014 - The MIntAct project--IntAct as a common curation platform for 11 molecular interaction databases
Orchard, S; Ammari, M; Aranda, B; Breuza, L; Briganti, L; Broackes-Carter, F; Campbell, Nh; Chavali, G; Chen, C; Del-Toro, N; Duesbury, M; Dumousseau, M; Galeota, E; Hinz, U; Iannuccelli, M; Jagannathan, S; Jimenez, R; Khadake, J; Lagreid, A; Licata, L; Lovering, Rc; Meldal, B; Melidoni, An; Milagros, M; Peluso, D; Perfetto, L; Porras, P; Raghunath, A; Ricard-Blum, S; Roechert, B; Stutz, A; Tognolli, M; Van Roey, K; Cesareni, G; Hermjakob, H - 01a Articolo in rivista
paper: NUCLEIC ACIDS RESEARCH (Oxford : Oxford University Press) pp. - - issn: 1362-4962 - wos: WOS:000331139800054 (1286) - scopus: 2-s2.0-84891799734 (1355)

11573/1660159 - 2013 - HuPho: the human phosphatase portal
Liberti, S; Sacco, F; Calderone, A; Perfetto, L; Iannuccelli, M; Panni, S; Santonico, E; Palma, A; Nardozza, Ap; Castagnoli, L; Cesareni, G - 01a Articolo in rivista
paper: THE FEBS JOURNAL (Blackwell Pub., Oxford, UK) pp. - - issn: 1742-4658 - wos: WOS:000313906000004 (49) - scopus: 2-s2.0-84872816249 (52)

11573/1660186 - 2013 - Exploring the diversity of SPRY/B30.2-mediated interactions
Perfetto, L; Gherardini, Pf; Davey, Ne; Diella, F; Helmer-Citterich, M; Cesareni, G - 01a Articolo in rivista
paper: TRENDS IN BIOCHEMICAL SCIENCES (Elsevier Trends Journals:An Imprint of Elsevier Science Limited, The Boulevard, Langford Lane, Kidlington, Oxford 0X5 1GB United Kingdom:011 44 1865 843000, 011 44 1865 843699, Fax: 011 44 1865 843010) pp. - - issn: 0968-0004 - wos: WOS:000314143700006 (71) - scopus: 2-s2.0-84871474752 (56)

11573/1660165 - 2012 - The protein interaction network mediated by human SH3 domains
Carducci, M; Perfetto, L; Briganti, L; Paoluzi, S; Costa, S; Zerweck, J; Schutkowski, M; Castagnoli, L; Cesareni, G - 01a Articolo in rivista
paper: BIOTECHNOLOGY ADVANCES (Elsevier Science Limited:Oxford Fulfillment Center, PO Box 800, Kidlington Oxford OX5 1DX United Kingdom:011 44 1865 843000, 011 44 1865 843699, EMAIL: asianfo@elsevier.com, tcb@elsevier.co.UK, INTERNET: http://www.elsevier.com, http://www.elsevier.com/locate/shpsa/, Fax: 011 44 1865 843010) pp. - - issn: 0734-9750 - wos: WOS:000300479200002 (44) - scopus: 2-s2.0-84855756033 (46)

11573/1660176 - 2012 - MINT, the molecular interaction database: 2012 update
Licata, L; Briganti, L; Peluso, D; Perfetto, L; Iannuccelli, M; Galeota, E; Sacco, F; Palma, A; Nardozza, Ap; Santonico, E; Castagnoli, L; Cesareni, G - 01a Articolo in rivista
paper: NUCLEIC ACIDS RESEARCH (Oxford : Oxford University Press) pp. - - issn: 1362-4962 - wos: WOS:000298601300128 (753) - scopus: 2-s2.0-84860918589 (815)

11573/1660154 - 2012 - Protein interaction data curation: the International Molecular Exchange (IMEx) consortium
Orchard, S; Kerrien, S; Abbani, S; Aranda, B; Bhate, J; Bidwell, S; Bridge, A; Briganti, L; Brinkman, Fs; Cesareni, G; Chatr-Aryamontri, A; Chautard, E; Chen, C; Dumousseau, M; Goll, J; Hancock, Re; Hannick, Li; Jurisica, I; Khadake, J; Lynn, Dj; Mahadevan, U; Perfetto, L; Raghunath, A; Ricard-Blum, S; Roechert, B; Salwinski, L; Stümpflen, V; Tyers, M; Uetz, P; Xenarios, I; Hermjakob, H - 01a Articolo in rivista
paper: NATURE METHODS (New York, NY : Nature Pub. Group, c2004-) pp. - - issn: 1548-7091 - wos: WOS:000302218500015 (376) - scopus: 2-s2.0-84859208501 (419)

11573/1660174 - 2012 - The human phosphatase interactome: An intricate family portrait
Sacco, F; Perfetto, L; Castagnoli, L; Cesareni, G - 01a Articolo in rivista
paper: FEBS LETTERS (Elsevier BV:PO Box 211, 1000 AE Amsterdam Netherlands:011 31 20 4853757, 011 31 20 4853642, 011 31 20 4853641, EMAIL: nlinfo-f@elsevier.nl, INTERNET: http://www.elsevier.nl, Fax: 011 31 20 4853598) pp. - - issn: 0014-5793 - wos: WOS:000307295200021 (167) - scopus: 2-s2.0-84864583212 (175)

11573/1660158 - 2011 - BioCreative III interactive task: an overview
Arighi, Cn; Roberts, Pm; Agarwal, S; Bhattacharya, S; Cesareni, G; Chatr-Aryamontri, A; Clematide, S; Gaudet, P; Giglio, Mg; Harrow, I; Huala, E; Krallinger, M; Leser, U; Li, D; Liu, F; Lu, Z; Maltais, Lj; Okazaki, N; Perfetto, L; Rinaldi, F; Sætre, R; Salgado, D; Srinivasan, P; Thomas, Pe; Toldo, L; Hirschman, L; Wu, Ch - 01a Articolo in rivista
paper: BMC BIOINFORMATICS ([London]: BioMed Central, [2000]-) pp. - - issn: 1471-2105 - wos: WOS:000303932700004 (39) - scopus: 2-s2.0-80053393894 (69)

11573/1660180 - 2011 - Benchmarking of the 2010 BioCreative Challenge III text-mining competition by the BioGRID and MINT interaction databases
Chatr-Aryamontri, A; Winter, A; Perfetto, L; Briganti, L; Licata, L; Iannuccelli, M; Castagnoli, L; Cesareni, G; Tyers, M - 01a Articolo in rivista
paper: BMC BIOINFORMATICS ([London]: BioMed Central, [2000]-) pp. - - issn: 1471-2105 - wos: WOS:000303932700008 (12) - scopus: 2-s2.0-80053430329 (12)

11573/1660156 - 2011 - The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text
Krallinger, M; Vazquez, M; Leitner, F; Salgado, D; Chatr-Aryamontri, A; Winter, A; Perfetto, L; Briganti, L; Licata, L; Iannuccelli, M; Castagnoli, L; Cesareni, G; Tyers, M; Schneider, G; Rinaldi, F; Leaman, R; Gonzalez, G; Matos, S; Kim, S; Wilbur, Wj; Rocha, L; Shatkay, H; Tendulkar, Av; Agarwal, S; Liu, F; Wang, X; Rak, R; Noto, K; Elkan, C; Lu, Z; Dogan, Ri; Fontaine, Jf; Andrade-Navarro, Ma; Valencia, A - 01a Articolo in rivista
paper: BMC BIOINFORMATICS ([London]: BioMed Central, [2000]-) pp. - - issn: 1471-2105 - wos: WOS:000303932700003 (88) - scopus: 2-s2.0-80053423937 (116)

11573/1660167 - 2009 - MINT, the molecular interaction database: 2009 update
Ceol, A; Chatr Aryamontri, A; Licata, L; Peluso, D; Briganti, L; Perfetto, L; Castagnoli, L; Cesareni, G - 01a Articolo in rivista
paper: NUCLEIC ACIDS RESEARCH (Oxford : Oxford University Press) pp. - - issn: 1362-4962 - wos: WOS:000276399100086 (391) - scopus: 2-s2.0-75549083295 (438)

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