STEFANO PASCARELLA

Professore ordinario

email: stefano.pascarella@uniroma1.it
telefono: 0649910998
edificio: CU027
stanza: 216

CURRICULUM VITAE

Stefano Pascarella

Full Professor
Dipartimento di Scienze biochimiche “A. Rossi Fanelli” – Sapienza – Università di Roma
Tel. +39 06 4991 7694
e-mail Stefano.Pascarella@uniroma1.it

WORK EXPERIENCE

2001-today Full Professor BIO/10; Sapienza Università di Roma; Teaching and Research activity: Biochemistry, Structural Bioinformatics

2000-2001 Associate Professor BIO/10; Sapienza Università di Roma; Teaching and Research activity: Biochemistry, Structural Bioinformatics

1991-2000 Ricercatore BIO/10; Sapienza Università di Roma; Teaching and Research activity: Biochemistry, Structural Bioinformatics

1990-1991 Post-doc fellow (European Community Fellowship; EMBO Fellowship)
EMBL – Heidelberg; Biocomputing division. Research activity: Structural Bioinformatics

1989 (1 m) Visiting fellow; Department of Biochemistry, Medical College of Virginia, Richmond, Virginia, U.S.A. Research activity: Biochemistry

1985 (3 m) Visiting fellow; Department of Biochemistry, Medical College of Virginia, Richmond, Virginia, U.S.A. Research activity: Biochemistry

EDUCATION AND TRAINING

1986-1989 PhD in Biochemistry
University of Rome, La Sapienza
Project: Site directed mutagenesis of Serine hydroxymethyltransferase; protein purification; structural bioinformatics

1984 Laurea in Scienze biologiche 110/110 cum laude
University of Rome, La Sapienza
Project: Determination of the primary structure of cytosolic rabbit SHMT

1978 Maturità classica (Grammar school)
Liceo Ginnasio Statale Luciano Manara


PERSONAL SKILLS

Mother tongue Italian

Other languages UNDERSTANDING SPEAKING WRITING
Listening Reading Spoken interaction Spoken production
English B2 C1 B1 B2 B2

ORGANIZATIONAL AND TEACHING ACTIVITIES

• Tutor of PhD, Graduate, and Post-Docs students
• Co-founder and member of the of the Teaching Board of the one-year Master in Bioinformatics (since 2001)
• Director of the Master in Bioinformatics (since 2010)
• Principal investigator of research projects
• Member of Department commissions
• Member of the Teaching Board of the former PhD program in Biophysics (until 2013)
• Member of the Teaching Board of PhD program in Biochemistry (since 2015)
• Course of Biochemistry (Biological Sciences)
• Course of Bioinformatics (Master in Genomics, Industrial and Environmental Biotechnology)
• Director of the Sapienza Advanced Course in Bioinformatics since 2021

TECHICAL SKILLS

• Molecular Graphics; Web site management; Use of software for protein and nucleic acid sequences and protein structure analysis.
• Computer programming using Perl, C and bash scripting. Operating systems: Mac OS-X, Linux, MS Windows. R language.

FUNDING

• Principal investigator of Sapienza University Research Projects;
• Participant in National Research Projects (PRIN);
• Participant in Cenci-Bolognetti projects;
• Principal investigator of the PNRA (Progetto Nazionale Ricerca Antartide) 2004 1.8
• Participant in “Progetto FILAS 2016 Regione Lazio”

OTHER ACTIVITIES

• Referee for international scientific journals: AminoAcids; BBA; Bioinformatics; BMC Structural biology; Computational biology and chemistry; Current microbiology; Genome Biology and Evolution; Gene; Interdisciplinary sciences: computational life sciences; J Computer Aided Molecular Design; Microbial genomics; Molecular BioSystems; Plos ONE; Scientific Report; European Journal of Biochemistry; FEBS journal; Comparative Biochemistry and Physiology
• Member of the Biotechnology panel evaluation in the framework of IV FP of the European Commission
• Referee for evaluation of scientific projects (Norway, Poland);
• Referee for evaluation of National Projects (PRIN)
• Program Committee member of the Meetings BITS2012, BITS2013, BITS2014;
• Associate Editor of the BITS Supplement to BMC Bioinformatics (2012, 2013, 2014);
• Member of the Editorial Board of Biochemistry Research International, Hindawi Publishing Corporation;
• Member of the Editorial Board of BioMed Research International, Hindawi Publishing
• Guest Editor of Symmetry Special Issue: "Structural Symmetry and Protein Function", MDPI Publishing
• Member of the Editorial Board of Open Life Sciences, De Gruyter Publishing
• Sapienza delegate with the ELIXIR-IIB Board (since 2017)


INVITED ORALCONTRIBUTIONS

• VI National meeting “Proteine ‘91”, Trieste
• “Vitamin B6 and carbonyl catalysis”, Capri, 22-27 Maggio 1994
• National School in Protein Science (Urbino, 5-9 settembre 1994)
• National School in Protein Scienc (Urbino, 18-22 settembre 1995)
• School in Protein Structure and Function (L’Aquila, 25-27 Maggio 2000)
• Course “Bioinformatica”, IST, Genova 1-2 luglio, 2004
• SIB-BIB 2000 Meeting “Biochemistry and Biotechnology”, Como, June 27-29, 2000
• XVII National SIB Meeting “Proteine 2004”, Viterbo, May 20-22, 2004
• Lecture, Dipartimento di Biotecnologie e Bioscienze – Università degli Studi di Milano “Bicocca”, Dec 15, 2004
• SIB Workshop "Biologia Computazionale e di Sistema", Bologna, June 28, 2017


MEMBERSHIPS

• SIB, Società Italiana di Biochimica e Biologia Molecolare

Produzione scientifica

11573/1680876 - 2023 - SARS-CoV CH.1.1 variant: Genomic and structural insight
Bazzani, Liliana; Imperia, Elena; Scarpa, Fabio; Sanna, Daria; Casu, Marco; Borsetti, Alessandra; Pascarella, Stefano; Petrosillo, Nicola; Cella, Eleonora; Giovanetti, Marta; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: INFECTIOUS DISEASE REPORTS (Basel: MDPI Pavia: PAGEPress) pp. 292-298 - issn: 2036-7449 - wos: WOS:001017257000001 (5) - scopus: 2-s2.0-85163576849 (5)

11573/1673753 - 2023 - Two sides of the same coin: the N-terminal and the receptor binding domains of SARS-CoV-2 Spike
Ciccozzi, Massimo; Pascarella, Stefano - 01m Editorial/Introduzione in rivista
rivista: FUTURE VIROLOGY (London : Future Medicine, 2006-) pp. 75-78 - issn: 1746-0794 - wos: WOS:000944000000001 (3) - scopus: 2-s2.0-85150485943 (3)

11573/1686077 - 2023 - Epidemic history and evolution of an emerging threat of international concern, the severe acute respiratory syndrome coronavirus 2
Giovanetti, Marta; Branda, Francesco; Cella, Eleonora; Scarpa, Fabio; Bazzani, Liliana; Ciccozzi, Alessandra; Slavov, Svetoslav Nanev; Benvenuto, Domenico; Sanna, Daria; Casu, Marco; Santos, Luciane Amorim; Lai, Alessia; Zehender, Giangluglielmo; Caccuri, Francesca; Ianni, Andrea; Caruso, Arnaldo; Maroutti, Antonello; Pascarella, Stefano; Borsetti, Alessandra; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: JOURNAL OF MEDICAL VIROLOGY (-Hoboken, NJ : John Wiley & Sons Incorporated -[New York] Alan R. Liss, 1977-) pp. - - issn: 0146-6615 - wos: WOS:001059179200034 (5) - scopus: 2-s2.0-85166593662 (6)

11573/1690898 - 2023 - IncRna: The R Package for Optimizing lncRNA Identification Processes
Jastrzebski, Jan Pawel; Pascarella, Stefano; Lipka, Aleksandra; Dorocki, Slawomir - 01a Articolo in rivista
rivista: JOURNAL OF COMPUTATIONAL BIOLOGY (Mary Ann Liebert Incorporated:2 Madison Avenue:Larchmont, NY 10538:(914)834-3100, EMAIL: info@liebertpub.com, swilliams@liebertpub.com, INTERNET: http://www.liebertpub.com, Fax: (914)834-3688) pp. - - issn: 1066-5277 - wos: WOS:001106207800001 (0) - scopus: 2-s2.0-85176217020 (0)

11573/1679508 - 2023 - Resources and tools for rare disease variant interpretation
Licata, Luana; Via, Allegra; Turina, Paola; Babbi, Giulia; Benevenuta, Silvia; Carta, Claudio; Casadio, Rita; Cicconardi, Andrea; Facchiano, Angelo; Fariselli, Piero; Giordano, Deborah; Isidori, Federica; Marabotti, Anna; Martelli, Pier Luigi; Pascarella, Stefano; Pinelli, Michele; Pippucci, Tommaso; Russo, Roberta; Savojardo, Castrense; Scafuri, Bernardina; Valeriani, Lucrezia; Capriotti, Emidio - 01a Articolo in rivista
rivista: FRONTIERS IN MOLECULAR BIOSCIENCES (Lausanne : Frontiers Media S.A., 2014-) pp. - - issn: 2296-889X - wos: WOS:001000438900001 (3) - scopus: 2-s2.0-85160058924 (3)

11573/1687104 - 2023 - Integrative genome-based survey of the SARS-CoV-2 Omicron XBB.1.16 variant
Scarpa, Fabio; Azzena, Ilenia; Ciccozzi, Alessandra; Giovanetti, Marta; Locci, Chiara; Casu, Marco; Fiori, Pier Luigi; Borsetti, Alessandra; Cella, Eleonora; Quaranta, Miriana; Pascarella, Stefano; Sanna, Daria; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (Basel: MDPI Center) pp. 13573- - issn: 1422-0067 - wos: WOS:001060646300001 (3) - scopus: 2-s2.0-85170222859 (3)

11573/1676908 - 2023 - Molecular in-depth on the epidemiological expansion of SARS-CoV-2 XBB.1.5
Scarpa, Fabio; Azzena, Ilenia; Locci, Chiara; Casu, Marco; Fiori, Pier Luigi; Ciccozzi, Alessandra; Angeletti, Silvia; Imperia, Elena; Giovanetti, Marta; Maruotti, Antonello; Borsetti, Alessandra; Cauda, Roberto; Cassone, Antonio; Via, Allegra; Pascarella, Stefano; Sanna, Daria; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: MICROORGANISMS (Basel : MDPI) pp. 912- - issn: 2076-2607 - wos: WOS:000977957200001 (10) - scopus: 2-s2.0-85156271815 (10)

11573/1686171 - 2023 - Update on the phylodynamic and genetic variability of Marburg virus
Scarpa, Fabio; Bazzani, Liliana; Giovanetti, Marta; Ciccozzi, Alessandra; Benedetti, Francesca; Zella, Davide; Sanna, Daria; Casu, Marco; Borsetti, Alessandra; Cella, Eleonora; Pascarella, Stefano; Maruotti, Antonello; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: VIRUSES (Basel: MDPI) pp. 1721- - issn: 1999-4915 - wos: WOS:001056054600001 (0) - scopus: 2-s2.0-85168731033 (0)

11573/1676710 - 2023 - Genome-based survey of the SARS-CoV-2 BF.7 variant from Asia
Scarpa, Fabio; Giovanetti, Marta; Azzena, Ilenia; Locci, Chiara; Casu, Marco; Fiori, Pier Luigi; Ciccozzi, Alessandra; Imperia, Elena; Bazzani, Liliana; Borsetti, Alessandra; Maruotti, Antonello; Pascarella, Stefano; Sanna, Daria; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: JOURNAL OF MEDICAL VIROLOGY (-Hoboken, NJ : John Wiley & Sons Incorporated -[New York] Alan R. Liss, 1977-) pp. - - issn: 0146-6615 - wos: WOS:000989594000009 (7) - scopus: 2-s2.0-85152909164 (8)

11573/1673653 - 2023 - Genetic and structural genome-based survey reveals the low potential for epidemiological expansion of the SARS-CoV-2 XBB.1.5 sublineage
Scarpa, Fabio; Imperia, Elena; Azzena, Ilenia; Giovanetti, Marta; Benvenuto, Domenico; Locci, Chiara; Casu, Marco; Fiori, Pier Luigi; Maruotti, Antonello; Ceccarelli, Giancarlo; Borsetti, Alessandra; Caruso, Arnaldo; Cauda, Roberto; Cassone, Antonio; Via, Allegra; Pascarella, Stefano; Sanna, Daria; Ciccozzi, Massimo - 01f Lettera, Nota
rivista: JOURNAL OF INFECTION (Harcourt Publishers Limited:Foots Cray High Street, Sidcup Kent DA14 5HP United Kingdom:011 44 20 83085700, EMAIL: journals@harcourt.com, INTERNET: http://www.harcourt-international.com, Fax: 011 44 20 83085876) pp. - - issn: 0163-4453 - wos: WOS:001000883300001 (6) - scopus: 2-s2.0-85152910788 (7)

11573/1681727 - 2023 - Khosta: a genetic and structural point of view of the forgotten virus
Scarpa, Fabio; Imperia, Elena; Ciccozzi, Alessandra; Pascarella, Stefano; Quaranta, Miriana; Giovanetti, Marta; Borsetti, Alessandra; Petrosillo, Nicola; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: INFECTIOUS DISEASE REPORTS (Basel: MDPI Pavia: PAGEPress) pp. 307-318 - issn: 2036-7449 - wos: WOS:001015080100001 (0) - scopus: 2-s2.0-85163620243 (0)

11573/1685156 - 2023 - SARS-CoV-2 recombinants: genomic comparison between XBF and its parental lineages
Scarpa, Fabio; Locci, Chiara; Azzena, Ilenia; Casu, Marco; Fiori, Pier Luigi; Ciccozzi, Alessandra; Giovanetti, Marta; Quaranta, Miriana; Ceccarelli, Giancarlo; Pascarella, Stefano; Ciccozzi, Massimo; Sanna, Daria - 01a Articolo in rivista
rivista: MICROORGANISMS (Basel : MDPI) pp. 1824- - issn: 2076-2607 - wos: WOS:001036434100001 (4) - scopus: 2-s2.0-85166175166 (4)

11573/1687345 - 2023 - Genetic and structural analyses reveal the low potential of the SARS‐CoV‐2 EG.5 variant
Scarpa, Fabio; Pascarella, Stefano; Ciccozzi, Alessandra; Giovanetti, Marta; Azzena, Ilenia; Locci, Chiara; Casu, Marco; Fiori, Pier Luigi; Quaranta, Miriana; Cella, Eleonora; Sanna, Daria; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: JOURNAL OF MEDICAL VIROLOGY (-Hoboken, NJ : John Wiley & Sons Incorporated -[New York] Alan R. Liss, 1977-) pp. - - issn: 0146-6615 - wos: WOS:001079032200006 (8) - scopus: 2-s2.0-85169649654 (7)

11573/1673793 - 2023 - Genome-based comparison between the recombinant SARS-CoV-2 XBB and its parental lineages
Scarpa, Fabio; Sanna, Daria; Azzena, Ilenia; Casu, Marco; Cossu, Piero; Fiori, Pier Luigi; Benvenuto, Domenico; Imperia, Elena; Giovanetti, Marta; Ceccarelli, Giancarlo; Cauda, Roberto; Cassone, Antonio; Pascarella, Stefano; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: JOURNAL OF MEDICAL VIROLOGY (-Hoboken, NJ : John Wiley & Sons Incorporated -[New York] Alan R. Liss, 1977-) pp. - - issn: 0146-6615 - wos: WOS:000960340500053 (24) - scopus: 2-s2.0-85151167783 (24)

11573/1677669 - 2023 - Avian influenza A H5N1: are we really sure it is a spillover?
Scarpa, Fabio; Sanna, Daria; Giovanetti, Marta; Pascarella, Stefano; Casu, Marco; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: PATHOGENS AND GLOBAL HEALTH (London : Maney Publishing, 2012-) pp. 1-3 - issn: 2047-7724 - wos: WOS:000970552500001 (4) - scopus: 2-s2.0-85152786853 (4)

11573/1628498 - 2022 - SARS-CoV-2 pandemic tracing in Italy highlights lineages with mutational burden in growing subsets
Boccia, Angelo; Tufano, Rossella; Ferrucci, Veronica; Sepe, Leandra; Bianchi, Martina; Pascarella, Stefano; Zollo, Massimo; Paolella, Giovanni - 01a Articolo in rivista
rivista: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (Basel: MDPI Center) pp. 4155- - issn: 1422-0067 - wos: WOS:000786123700001 (1) - scopus: 2-s2.0-85127744823 (3)

11573/1651441 - 2022 - The biological properties of the SARS-CoV-2 Cameroon variant spike: an intermediate between the Alpha and Delta variants
Pascarella, Stefano; Bianchi, Martina; Giovanetti, Marta; Benvenuto, Domenico; Borsetti, Alessandra; Cauda, Roberto; Cassone, Antonio; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: PATHOGENS (Basel : Multidisciplinary Digital Publishing Institute) pp. 814- - issn: 2076-0817 - wos: WOS:000833884600001 (1) - scopus: 2-s2.0-85135624714 (1)

11573/1612072 - 2022 - The SARS-CoV-2 mu variant shouldn't be left aside: it warrants attention for its immuo-escaping ability
Pascarella, Stefano; Bianchi, Martina; Giovanetti, Marta; Narzi, Daniele; Cauda, Roberto; Cassone, Antonio; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: JOURNAL OF MEDICAL VIROLOGY (-Hoboken, NJ : John Wiley & Sons Incorporated -[New York] Alan R. Liss, 1977-) pp. - - issn: 0146-6615 - wos: WOS:000761813000001 (4) - scopus: 2-s2.0-85125365933 (4)

11573/1651825 - 2022 - Peculiar variations of the electrostatic potential of spike protein N-terminal domain associated with the emergence of successive SARS-CoV-2 Omicron lineages
Pascarella, Stefano; Ciccozzi, Massimo; Benvenuto, Domenico; Borsetti, Alessandra; Cauda, Roberto; Cassone, Antonio - 01f Lettera, Nota
rivista: JOURNAL OF INFECTION (Harcourt Publishers Limited:Foots Cray High Street, Sidcup Kent DA14 5HP United Kingdom:011 44 20 83085700, EMAIL: journals@harcourt.com, INTERNET: http://www.harcourt-international.com, Fax: 011 44 20 83085876) pp. - - issn: 0163-4453 - wos: WOS:000911667800021 (8) - scopus: 2-s2.0-85138521065 (8)

11573/1613435 - 2022 - The value of electrostatic potentials of the spike receptor binding and N-terminal domains in addressing transmissibility and infectivity of SARS-CoV-2 variants of concern
Pascarella, Stefano; Ciccozzi, Massimo; Bianchi, Martina; Benvenuto, Domenico; Cauda, Roberto; Cassone, Antonio - 01f Lettera, Nota
rivista: JOURNAL OF INFECTION (Harcourt Publishers Limited:Foots Cray High Street, Sidcup Kent DA14 5HP United Kingdom:011 44 20 83085700, EMAIL: journals@harcourt.com, INTERNET: http://www.harcourt-international.com, Fax: 011 44 20 83085876) pp. - - issn: 0163-4453 - wos: WOS:000799523700002 (15) - scopus: 2-s2.0-85129301316 (13)

11573/1634375 - 2022 - A novel human neutralizing mAb recognizes delta, gamma and omicron variants of SARS-CoV-2 and can be used in combination with sotrovimab
Passariello, Margherita; Ferrucci, Veronica; Sasso, Emanuele; Manna, Lorenzo; Lembo, Rosa Rapuano; Pascarella, Stefano; Fusco, Giovanna; Zambrano, Nicola; Zollo, Massimo; De Lorenzo, Claudia - 01a Articolo in rivista
rivista: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (Basel: MDPI Center) pp. 5556- - issn: 1422-0067 - wos: WOS:000803694800001 (2) - scopus: 2-s2.0-85131609384 (2)

11573/1654252 - 2022 - On the SARS-CoV-2 BA.2.75 variant: A genetic and structural point of view
Scarpa, F; Sanna, D; Azzena, I; Giovanetti, M; Benvenuto, D; Angeletti, S; Ceccarelli, G; Pascarella, S; Casu, M; Fiori, Pl; Ciccozzi, M - 01f Lettera, Nota
rivista: JOURNAL OF MEDICAL VIROLOGY (-Hoboken, NJ : John Wiley & Sons Incorporated -[New York] Alan R. Liss, 1977-) pp. 1-4 - issn: 0146-6615 - wos: WOS:000852298000001 (20) - scopus: 2-s2.0-85137783694 (21)

11573/1661806 - 2022 - Genetic and structural data on the SARS-CoV-2 Omicron BQ.1 variant reveal its low potential for epidemiological expansion
Scarpa, Fabio; Sanna, Daria; Benvenuto, Domenico; Borsetti, Alessandra; Azzena, Ilenia; Casu, Marco; Fiori, Pier Luigi; Giovanetti, Marta; Maruotti, Antonello; Ceccarelli, Giancarlo; Caruso, Arnaldo; Caccuri, Francesca; Cauda, Roberto; Cassone, Antonio; Pascarella, Stefano; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (Basel: MDPI Center) pp. 15264- - issn: 1422-0067 - wos: WOS:000896526300001 (17) - scopus: 2-s2.0-85143716845 (17)

11573/1518379 - 2021 - The bayesian reconstruction and the evolutionary history of salivirus type 1 and type 2: the worldwide spreading
Angeletti, Silvia; Benvenuto, Domenico; Fogolari, Marta; De Flora, Cecilia; Ceccarelli, Giancarlo; Maida, Ivana; Bazzardi, Riccardo; Spoto, Silvia; Pascarella, Stefano; Mugosa, Boban; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: JOURNAL OF INFECTION IN DEVELOPING COUNTRIES (Sassari : OLoeP (Open Learning on Enteric Pathogens )) pp. 280-288-288 - issn: 1972-2680 - wos: WOS:000631902900016 (0) - scopus: 2-s2.0-85102597678 (0)

11573/1585104 - 2021 - SARS-CoV-2 AY.4.2 variant circulating in Italy: genomic preliminary insight
Angeletti, Silvia; Giovanetti, Marta; Fogolari, Marta; Cella, Eleonora; De Florio, Lucia; Lintas, Carla; Veralli, Roberta; Francesconi, Maria; Caccuri, Francesca; De Cesaris, Marina; De Flora, Cecilia; Ceccarelli, Giancarlo; Spoto, Silvia; Caruso, Arnaldo; Pascarella, Stefano; Riva, Elisabetta; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: JOURNAL OF MEDICAL VIROLOGY (-Hoboken, NJ : John Wiley & Sons Incorporated -[New York] Alan R. Liss, 1977-) pp. - - issn: 0146-6615 - wos: WOS:000719383100001 (11) - scopus: 2-s2.0-85119078595 (11)

11573/1473056 - 2021 - SARS-Cov-2 ORF3a: mutability and function
Bianchi, Martina; Borsetti, Alessandra; Ciccozzi, Massimo; Pascarella, Stefano - 01a Articolo in rivista
rivista: INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES (-Attuale :ELSEVIER SCIENCE BV, PO BOX 211, AMSTERDAM, NETHERLANDS, 1000 AE -Butterworth Heinemann Publishers:Linacre House Jordan Hill, Oxford OX2 8DP United Kingdom:011 44 1865 314569, EMAIL: bhmarketing@repp.co.uk, INTERNET: http://www.laxtonsprices.co.uk, Fax: 011 44 1865 314569) pp. 820-826 - issn: 0141-8130 - wos: WOS:000613921400074 (62) - scopus: 2-s2.0-85098969761 (68)

11573/1522733 - 2021 - SARS-CoV-2 lineages and sub-lineages circulating worldwide: a dynamic overview
Cella, Eleonora; Benedetti, Francesca; Fabris, Silvia; Borsetti, Alessandra; Pezzuto, Aldo; Ciotti, Marco; Pascarella, Stefano; Ceccarelli, Giancarlo; Zella, Davide; Ciccozzi, Massimo; Giovanetti, Marta - 01a Articolo in rivista
rivista: CHEMOTHERAPY (Basel: S. Karger, 1968-) pp. 1-5-5 - issn: 1421-9794 - wos: WOS:000632547300001 (28) - scopus: 2-s2.0-85103316494 (29)

11573/1560469 - 2021 - Long-chain polyphosphates impair SARS-CoV-2 infection and replication
Ferrucci, Veronica; Kong, Dae-Young; Asadzadeh, Fatemeh; Marrone, Laura; Boccia, Angelo; Siciliano, Roberto; Criscuolo, Giuseppina; Anastasio, Camilla; Quarantelli, Fabrizio; Comegna, Marika; Pisano, Ida; Passariello, Margherita; Iacobucci, Ilaria; Monica, Rosa Della; Izzo, Barbara; Cerino, Pellegrino; Fusco, Giovanna; Viscardi, Maurizio; Brandi, Sergio; Pierri, Bianca Maria; Borriello, Giorgia; Tiberio, Claudia; Atripaldi, Luigi; Bianchi, Martina; Paolella, Giovanni; Capoluongo, Ettore; Castaldo, Giuseppe; Chiariotti, Lorenzo; Monti, Maria; De Lorenzo, Claudia; Yun, Kyong-Seop; Pascarella, Stefano; Cheong, Jae-Ho; Kim, Hong-Yeoul; Zollo, Massimo - 01a Articolo in rivista
rivista: SCIENCE SIGNALING () pp. eabe5040- - issn: 1937-9145 - wos: WOS:000675603900002 (23) - scopus: 2-s2.0-85109431828 (25)

11573/1541907 - 2021 - SARS-CoV-2 shifting transmission dynamics and hidden reservoirs potentially limit efficacy of public health interventions in Italy
Giovanetti, Marta; Cella, Eleonora; Benedetti, Francesca; Rife Magalis, Brittany; Fonseca, Vagner; Fabris, Silvia; Campisi, Giovanni; Ciccozzi, Alessandra; Angeletti, Silvia; Borsetti, Alessandra; Tambone, Vittoradolfo; Sagnelli, Caterina; Pascarella, Stefano; Riva, Alberto; Ceccarelli, Giancarlo; Marcello, Alessandro; Azarian, Taj; Wilkinson, Eduan; De Oliveira, Tulio; Alcantara, Luiz Carlos Junior; Cauda, Roberto; Caruso, Arnaldo; Dean, Natalie E; Browne, Cameron; Lourenco, Jose; Salemi, Marco; Zella, Davide; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: COMMUNICATIONS BIOLOGY ([London]: Springer Nature) pp. 489- - issn: 2399-3642 - wos: WOS:000643938500002 (20) - scopus: 2-s2.0-85104775295 (22)

11573/1594316 - 2021 - The electrostatic potential of the Omicron variant spike is higher than in Delta and Delta-plus variants: a hint to higher transmissibility?
Pascarella, Stefano; Ciccozzi, Massimo; Bianchi, Martina; Benvenuto, Domenico; Cauda, Roberto; Cassone, Antonio - 01a Articolo in rivista
rivista: JOURNAL OF MEDICAL VIROLOGY (New York, NY : Wiley-Liss) pp. - - issn: 1096-9071 - wos: WOS:000734477700001 (55) - scopus: 2-s2.0-85121741554 (54)

11573/1580256 - 2021 - Shortening epitopes to survive: the case of SARS-CoV-2 lambda variant
Pascarella, Stefano; Ciccozzi, Massimo; Bianchi, Martina; Benvenuto, Domenico; Giovanetti, Marta; Cauda, Roberto; Cassone, Antonio - 01a Articolo in rivista
rivista: BIOMOLECULES (Basel: MDPI) pp. - - issn: 2218-273X - wos: WOS:000716966100001 (4) - scopus: 2-s2.0-85116799846 (4)

11573/1562347 - 2021 - SARS-CoV-2 B.1.617 Indian variants: are electrostatic potential changes responsible for a higher transmission rate?
Pascarella, Stefano; Ciccozzi, Massimo; Zella, Davide; Bianchi, Martina; Benetti, Francesca; Benvenuto, Domenico; Broccolo, Francesco; Cauda, Roberto; Caruso, Arnaldo; Angeletti, Silvia; Giovanetti, Marta; Cassone, Antonio - 01a Articolo in rivista
rivista: JOURNAL OF MEDICAL VIROLOGY (-Hoboken, NJ : John Wiley & Sons Incorporated -[New York] Alan R. Liss, 1977-) pp. - - issn: 0146-6615 - wos: WOS:000678554400001 (70) - scopus: 2-s2.0-85111278823 (76)

11573/1537374 - 2021 - The importance of genomic analysis in cracking the Coronavirus pandemic
Zella, Davide; Giovanetti, Marta; Cella, Eleonora; Borsetti, Alessandra; Ciotti, Marco; Ceccarelli, Giancarlo; D'ettorre, Gabriella; Pezzuto, Aldo; Tambone, Vittoradolfo; Campanozzi, Laura; Magheri, Marco; Unali, Francesco; Bianchi, Martina; Benedetti, Francesca; Pascarella, Stefano; Angeletti, Silvia; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: EXPERT REVIEW OF MOLECULAR DIAGNOSTICS (--London, United Kingdom: Expert Reviews Ltd -London : Future Drugs, 2001-) pp. - - issn: 1473-7159 - wos: WOS:000648136300001 (9) - scopus: 2-s2.0-85105127504 (11)

11573/1365140 - 2020 - COVID-2019: the role of the nsp2 and nsp3 in its pathogenesis
Angeletti, Silvia; Benvenuto, Domenico; Bianchi, Martina; Giovanetti, Marta; Pascarella, Stefano; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: JOURNAL OF MEDICAL VIROLOGY (New York, NY : Wiley-Liss) pp. - - issn: 1096-9071 - wos: WOS:000526462000014 (224) - scopus: 2-s2.0-85080113316 (270)

11573/1559645 - 2020 - Evolutionary analysis of SARS-CoV-2: how mutation of Non-Structural Protein 6 (NSP6) could affect viral autophagy
Benvenuto, D.; Angeletti, S.; Giovanetti, M.; Bianchi, M.; Pascarella, S.; Cauda, R.; Ciccozzi, M.; Cassone, A. - 01a Articolo in rivista
rivista: JOURNAL OF INFECTION (Harcourt Publishers Limited:Foots Cray High Street, Sidcup Kent DA14 5HP United Kingdom:011 44 20 83085700, EMAIL: journals@harcourt.com, INTERNET: http://www.harcourt-international.com, Fax: 011 44 20 83085876) pp. e24-e27 - issn: 0163-4453 - wos: WOS:000540819000005 (163) - scopus: 2-s2.0-85083339362 (176)

11573/1407585 - 2020 - Evidence for mutations in SARS-CoV-2 Italian isolates potentially affecting virus transmission
Benvenuto, Domenico; Demir Ayse, Banu; Giovanetti, Marta; Bianchi, Martina; Angeletti, Silvia; Pascarella, Stefano; Cauda, Roberto; Ciccozzi, Massimo; Cassone, Antonio - 01a Articolo in rivista
rivista: JOURNAL OF MEDICAL VIROLOGY (New York, NY : Wiley-Liss) pp. - - issn: 1096-9071 - wos: WOS:000541079500001 (17) - scopus: 2-s2.0-85087152353 (18)

11573/1404870 - 2020 - Sars-cov-2 envelope and membrane proteins: structural differences linked to virus characteristics?
Bianchi, Martina; Benvenuto, Domenico; Giovanetti, Marta; Angeletti, Silvia; Ciccozzi, Massimo; Pascarella, Stefano - 01a Articolo in rivista
rivista: BIOMED RESEARCH INTERNATIONAL ([London]: [Hindawi] Cairo: Hindawi Publishing Corporation) pp. - - issn: 2314-6133 - wos: WOS:000540576700008 (116) - scopus: 2-s2.0-85086857382 (137)

11573/1385176 - 2020 - Response to Ribeiro da Silva et al.,"role of nonstructural proteins in the pathogenesis of sars-cov-2
Ciccozzi, Massimo; Benvenuto, Domenico; Giovanetti, Marta; Bianchi, Martina; Pascarella, Stefano; Angeletti, Silvia - 01f Lettera, Nota
rivista: JOURNAL OF MEDICAL VIROLOGY (-Hoboken, NJ : John Wiley & Sons Incorporated -[New York] Alan R. Liss, 1977-) pp. - - issn: 0146-6615 - wos: WOS:000537005400001 (0) - scopus: 2-s2.0-85083865909 (1)

11573/1384021 - 2020 - Covid-19 outbreak: an overview
Ciotti, Marco; Angeletti, Silvia; Minieri, Marilena; Giovannetti, Marta; Benvenuto, Domenico; Pascarella, Stefano; Sagnelli, Caterina; Bianchi, Martina; Bernardini, Sergio; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: CHEMOTHERAPY (S Karger AG:Allschwilerstrasse 10, CH-4009 Basel Switzerland:011 41 61 3061111, EMAIL: orders@karger.ch, INTERNET: http://www.karger.com, Fax: 011 41 61 3061234) pp. 1-9-9 - issn: 0009-3157 - wos: WOS:000547517300001 (215) - scopus: 2-s2.0-85083169416 (247)

11573/1392843 - 2020 - Molecular dynamics of an asymmetric form of GabR, a bacterial transcriptional regulator
Frezzini, Mario; Narzi, Daniele; Maria Sciolari, Assia; Guidoni, Leonardo; Pascarella, Stefano - 01a Articolo in rivista
rivista: BIOPHYSICAL CHEMISTRY (Elsevier BV:PO Box 211, 1000 AE Amsterdam Netherlands:011 31 20 4853757, 011 31 20 4853642, 011 31 20 4853641, EMAIL: nlinfo-f@elsevier.nl, INTERNET: http://www.elsevier.nl, Fax: 011 31 20 4853598) pp. - - issn: 0301-4622 - wos: WOS:000534365400002 (4) - scopus: 2-s2.0-85084345742 (4)

11573/1381863 - 2020 - Interaction of Bacillus subtilis GabR with the gabTD promoter: role of repeated sequences and effect of GABA in transcriptional activation
Nardella, C.; Barile, A.; Di Salvo, M. L.; Milano, T.; Pascarella, S.; Tramonti, A.; Contestabile, R. - 01a Articolo in rivista
rivista: THE FEBS JOURNAL (Blackwell Pub., Oxford, UK) pp. - - issn: 1742-464X - wos: WOS:000520859400001 (7) - scopus: 2-s2.0-85082088243 (7)

11573/1448014 - 2020 - Structural analysis of merkel cell polyomavirus (MCPyV) viral capsid protein 1 (VP1) in HIV-1 infected individuals
Prezioso, Carla; Bianchi, Martina; Obregon, Francisco; Ciotti, Marco; Sarmati, Loredana; Andreoni, Massimo; Palamara, Anna Teresa; Pascarella, Stefano; Moens, Ugo; Pietropaolo, Valeria Antonietta - 01a Articolo in rivista
rivista: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (Basel (Matthaeustrasse 11) : Molecular Diversity Preservation International MDPI) pp. - - issn: 1661-6596 - wos: WOS:000589166400001 (11) - scopus: 2-s2.0-85094982386 (10)

11573/1326675 - 2019 - In silico identification of structural signatures in Arabidopsis thaliana pectin methylesterases
Bellincampi, Daniela; Andrea, Casciano; Del Corpo, Daniele; Lionetti, Vincenzo; Pascarella, Stefano - 04d Abstract in atti di convegno
congresso: 11th congress of the italian society of plant biology (Padova)
libro: SIBV - Abstract Book - ()

11573/1275113 - 2019 - Phylogeny of culex theileri virus flavivirus in Spain, Myanmar, Portugal and Turkey
Cella, Eleonora; Benvenuto, Domenico; Donati, Daniele; Garilli, Francesco; Angeletti, Silvia; Pascarella, Stefano; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: ASIAN PACIFIC JOURNAL OF TROPICAL MEDICINE (OXFORD, ENGLAND, : ELSEVIER SCI LTD, >Haikou, Hainan province China: Hainan Medical College.) pp. 216-223 - issn: 1995-7645 - wos: WOS:000470899600003 (3) - scopus: 2-s2.0-85067110699 (3)

11573/1313522 - 2019 - Atomistic simulations of GabR transcription factor at microsecond scale
Frezzini, Mario; Francescato, Fabio; Maria Sciolari, Assia; Narzi, Daniele; Guidoni, Leonardo; Pascarella, Stefano - 04d Abstract in atti di convegno
congresso: Biophysics@Rome2019 (Roma)
libro: Biophysics@Rome2019 Poster program - ()

11573/1340439 - 2019 - Conformational transitions induced by γ-amino butyrate binding in GabR, a bacterial transcriptional regulator
Frezzini, Mario; Guidoni, Leonardo; Pascarella, Stefano - 01a Articolo in rivista
rivista: SCIENTIFIC REPORTS (London: Springer Nature London: Nature Publishing Group) pp. 19319- - issn: 2045-2322 - wos: WOS:000503213000003 (5) - scopus: 2-s2.0-85076518957 (5)

11573/1268668 - 2019 - Computational classification of MocR transcriptional regulators into subgroups as a support for experimental and functional characterization
Pascarella, Stefano - 01a Articolo in rivista
rivista: BIOINFORMATION (Chennai : Biomedical Informatics Pvt. Ltd.) pp. 151-159 - issn: 0973-8894 - wos: WOS:000481417400010 (3) - scopus: (0)

11573/1179191 - 2018 - Multi-drug resistant Pseudomonas aeruginosa nosocomial strains: Molecular epidemiology and evolution
Angeletti, Silvia; Cella, Eleonora; Prosperi, Mattia; Spoto, Silvia; Fogolari, Marta; De Florio, Lucia; Antonelli, Francesca; Dedej, Etleva; De Flora, Cecilia; Ferraro, Elisabetta; Incalzi, Raffaele Antonelli; Coppola, Roberto; Dicuonzo, Giordano; Francescato, Fabio; Pascarella, Stefano; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: MICROBIAL PATHOGENESIS (Elsevier Science Limited:Oxford Fulfillment Center, PO Box 800, Kidlington Oxford OX5 1DX United Kingdom:011 44 1865 843000, 011 44 1865 843699, EMAIL: asianfo@elsevier.com, tcb@elsevier.co.UK, INTERNET: http://www.elsevier.com, http://www.elsevier.com/locate/shpsa/, Fax: 011 44 1865 843010) pp. 233-241 - issn: 0882-4010 - wos: WOS:000452578500036 (21) - scopus: 2-s2.0-85050135287 (23)

11573/1113025 - 2018 - Mayaro virus infection, the next epidemic wave after Zika? Evolutionary and structural analysis
Cella, Eleonora; Giovanetti, Marta; Milano, Teresa; Fogolari, Marta; Garilli, Francesco; Alexiev, Ivailo; Bazzardi, Riccardo; Salemi, Marco; Junior Alcantara, Luiz; Angeletti, Silvia; Pascarella, Stefano; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: ASIAN PACIFIC JOURNAL OF TROPICAL MEDICINE (OXFORD, ENGLAND, : ELSEVIER SCI LTD, >Haikou, Hainan province China: Hainan Medical College.) pp. 194-201 - issn: 1995-7645 - wos: WOS:000428837700003 (2) - scopus: 2-s2.0-85045470334 (2)

11573/1016014 - 2018 - A comprehensive computational analysis of Mycobacterium genomes pinpoints the genes co-occurring with ycze, a membrane protein coding gene under the putative control of a mocr, and predicts its function
Milano, Teresa; Angelaccio, Sebastiana; Tramonti, Angela; Di Salvo, Martino Luigi; Nogues, Isabel; Contestabile, Roberto; Pascarella, Stefano - 01a Articolo in rivista
rivista: INTERDISCIPLINARY SCIENCES: COMPUTATIONAL LIFE SCIENCES (Berlin: Springer) pp. 111-125 - issn: 1913-2751 - wos: WOS:000426823400011 (4) - scopus: 2-s2.0-85042877382 (3)

11573/1179103 - 2018 - The MocR-like transcription factors: pyridoxal 5'-phosphate-dependent regulators of bacterial metabolism
Tramonti, Angela; Nardella, Caterina; Di Salvo, Martino L.; Pascarella, Stefano; Contestabile, Roberto - 01a Articolo in rivista
rivista: THE FEBS JOURNAL (Blackwell Pub., Oxford, UK) pp. - - issn: 1742-464X - wos: WOS:000449688600003 (24) - scopus: 2-s2.0-85050355937 (24)

11573/905296 - 2017 - Study of DNA binding and bending by Bacillus subtilis GabR, a PLP-dependent transcription factor
Amidani, Davide; Tramonti, Angela; Canosa, Andrea Valeria; Campanini, Barbara; Maggi, Stefano; Milano, Teresa; Di Salvo, Martino Luigi; Pascarella, Stefano; Contestabile, Roberto; Bettati, Stefano; Rivetti, Claudio - 01a Articolo in rivista
rivista: BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS (Elsevier BV:PO Box 211, 1000 AE Amsterdam Netherlands:011 31 20 4853757, 011 31 20 4853642, 011 31 20 4853641, EMAIL: nlinfo-f@elsevier.nl, INTERNET: http://www.elsevier.nl, Fax: 011 31 20 4853598) pp. 3474-3489 - issn: 0304-4165 - wos: WOS:000390736300052 (18) - scopus: 2-s2.0-84994410820 (17)

11573/1070623 - 2017 - Molecular dynamics simulation unveils the conformational flexibility of the interdomain linker in the bacterial transcriptional regulator GabR from Bacillus subtilis bound to pyridoxal 5'-phosphate
Milano, Teresa; Gulzar, Adnan; Narzi, Daniele; Guidoni, Leonardo; Pascarella, Stefano - 01a Articolo in rivista
rivista: PLOS ONE (San Francisco, CA : Public Library of Science) pp. e0189270- - issn: 1932-6203 - wos: WOS:000418389500019 (9) - scopus: 2-s2.0-85038954212 (8)

11573/954194 - 2017 - Hepatitis C virus genotype 3A in a population of injecting drug users in Montenegro: Bayesian and evolutionary analysis
Mugosa, B.; Cella, Eleonora; Lai, A; Lo Presti, Alessandra; Blasi, A; Vratnica, Z.; Vujoševic, D; Ebranati, E; Lauševic, D; Guarino, M; Zehender, Gianguglielmo; Milano, Teresa; Pascarella, Stefano; Spoto, S; Angeletti, Silvia; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: ARCHIVES OF VIROLOGY (Springer-Verlag Wien:Sachsenplatz 4-6, PO Box 89, A-1201 Vienna Austria:011 43 1 3302415, EMAIL: springer@springer.co.at, INTERNET: http://link.springer-ny.com, Fax: 011 43 1 3302426) pp. 1-13 - issn: 0304-8608 - wos: WOS:000401119300010 (3) - scopus: 2-s2.0-85012241695 (3)

11573/949738 - 2017 - Salmonella typhimurium PtsJ is a novel MocR-like transcriptional repressor involved in regulating the vitamin B6 salvage pathway
Tramonti, Angela; Milano, Teresa; Nardella, Caterina; Di Salvo, Martino Luigi; Pascarella, Stefano; Contestabile, Roberto - 01a Articolo in rivista
rivista: THE FEBS JOURNAL (Blackwell Pub., Oxford, UK) pp. 466-484 - issn: 1742-464X - wos: WOS:000393601800010 (12) - scopus: 2-s2.0-85008498867 (13)

11573/885203 - 2016 - Data from computational analysis of the peptide linkers in the mocr bacterial transcriptional regulators
Angelaccio, Sebastiana; Milano, Teresa; Tramonti, Angela; Di Salvo, Martino Luigi; Contestabile, Roberto; Pascarella, Stefano - 01a Articolo in rivista
rivista: DATA IN BRIEF (New York : Elsevier Inc.) pp. 292-313 - issn: 2352-3409 - wos: WOS:000453170500046 (6) - scopus: 2-s2.0-85011789751 (6)

11573/954187 - 2016 - Klebsiella pneumoniae blaKPC-3 nosocomial epidemic: Bayesian and evolutionary analysis
Angeletti, S; Lo Presti, A; Cella, Eleonora; Fogolari, M; De Florio, L; Dedej, E; Blasi, A; Milano, Teresa; Pascarella, Stefano; Incalzi, R. A; Coppola, R; Dicuonzo, G; Ciccozzi, M. - 01a Articolo in rivista
rivista: INFECTION GENETICS AND EVOLUTION (Elsevier BV:PO Box 211, 1000 AE Amsterdam Netherlands:011 31 20 4853757, 011 31 20 4853642, 011 31 20 4853641, EMAIL: nlinfo-f@elsevier.nl, INTERNET: http://www.elsevier.nl, Fax: 011 31 20 4853598) pp. 85-93 - issn: 1567-1348 - wos: WOS:000390456000014 (5) - scopus: 2-s2.0-84993967034 (5)

11573/871597 - 2016 - Zika Virus spreading in South America: evolutionary analysis of emerging neutralizing resistant Phe279Ser strains
Giovanetti, Marta; Milano, Teresa; Alcantara, Luiz Carlos; Carcangiu, Laura; Cella, Eleonora; Lai, Alessia; Lo Presti, Alessandra; Pascarella, Stefano; Zehender, Gianguglielmo; Angeletti, Silvia; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: ASIAN PACIFIC JOURNAL OF TROPICAL MEDICINE (OXFORD, ENGLAND, : ELSEVIER SCI LTD, >Haikou, Hainan province China: Hainan Medical College.) pp. 445-452 - issn: 1995-7645 - wos: WOS:000375359100006 (13) - scopus: 2-s2.0-84964316512 (14)

11573/874429 - 2016 - A bioinformatics analysis reveals a group of MocR bacterial transcriptional regulators linked to a family of genes coding for membrane proteins
Milano, Teresa; Angelaccio, Sebastiana; Tramonti, Angela; Di Salvo, Martino Luigi; Contestabile, Roberto; Pascarella, Stefano - 01a Articolo in rivista
rivista: BIOCHEMISTRY RESEARCH INTERNATIONAL (Cairo: Hindawi Publishing Corporation) pp. ...-... - issn: 2090-2247 - wos: WOS:000379482800001 (6) - scopus: 2-s2.0-84982806318 (7)

11573/880467 - 2016 - Structural properties of the linkers connecting the n- and c- terminal domains in the mocr bacterial transcriptional regulators
Milano, Teresa; Angelaccio, Sebastiana; Tramonti, Angela; Di Salvo, Martino Luigi; Contestabile, Roberto; Pascarella, Stefano - 01a Articolo in rivista
rivista: BIOCHIMIE OPEN (Elsevier) pp. 8-18 - issn: 2214-0085 - wos: (0) - scopus: 2-s2.0-84980398163 (10)

11573/780584 - 2015 - On the mechanism of Escherichia coli pyridoxal kinase inhibition by pyridoxal and pyridoxal 5'-phosphate
Di Salvo, Martino Luigi; Nogués, I; Parroni, Alessia; Tramonti, A; Milano, Teresa; Pascarella, Stefano; Contestabile, Roberto - 01a Articolo in rivista
rivista: BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS (Tokyo ; Oxford ; New York ; London ; Amsterdam ; Shannon ; Paris : Elsevier) pp. - - issn: 1570-9639 - wos: WOS:000358466500012 (21) - scopus: 2-s2.0-84937627738 (23)

11573/954202 - 2015 - Preface: bits2014, the annual meeting of the italian society of bioinformatics
Facchiano, A; Angelini, C; Bosotti, R; Guffanti, A; Marabotti, A; Marangoni, R; Pascarella, Stefano; Romano, P; Zanzoni, A; Helmer Citterich, M. - 01a Articolo in rivista
rivista: BMC BIOINFORMATICS ([London]: BioMed Central, [2000]-) pp. - - issn: 1471-2105 - wos: WOS:000367875300001 (0) - scopus: 2-s2.0-84943166246 (0)

11573/785449 - 2015 - The aspartate aminotransferase-like domain of Firmicutes mocr transcriptional regulators
Milano, Teresa; Contestabile, Roberto; Lo Presti, Alessandra; Ciccozzi, Massimo; Pascarella, Stefano - 01a Articolo in rivista
rivista: COMPUTATIONAL BIOLOGY AND CHEMISTRY (Oxford : Elsevier, c2003-) pp. 55-61 - issn: 1476-9271 - wos: WOS:000364897700006 (15) - scopus: 2-s2.0-84930670598 (15)

11573/780481 - 2015 - Conserved water molecules in bacterial serine hydroxymethyltransferases
Milano, Teresa; Di Salvo, Martino Luigi; Angelaccio, Sebastiana; Pascarella, Stefano - 01a Articolo in rivista
rivista: PROTEIN ENGINEERING, DESIGN & SELECTION (Oxford University Press) pp. 415-426 - issn: 1741-0126 - wos: WOS:000362837000012 (4) - scopus: 2-s2.0-84947945579 (3)

11573/787433 - 2015 - Loss-of-function mutations in appl1 in familial diabetes mellitus
Prudente, Sabrina; Jungtrakoon, Prapaporn; Marucci, Antonella; Ludovico, Ornella; Buranasupkajorn, Patinut; Mazza, Tommaso; Hastings, Timothy; Milano, Teresa; Morini, Eleonora; Mercuri, Luana; Bailetti, Diego; Mendonca, Christine; Alberico, Federica; Basile, Giorgio; Romani, Marta; Miccinilli, Elide; Pizzuti, Antonio; Carella, Massimo; Barbetti, Fabrizio; Pascarella, Stefano; Marchetti, Piero; Trischitta, Vincenzo; Di Paola, Rosa; Doria, Alessandro - 01a Articolo in rivista
rivista: AMERICAN JOURNAL OF HUMAN GENETICS (University of Chicago Press:PO Box 37005, Journals Division:Chicago, IL 60637:(877)705-1878, (877)705-1878, (773)753-2247, EMAIL: subscriptions@press.uchicago.edu, INTERNET: http://www.press.uchicago.edu, Fax: (877)705-1879, (773)753-0811) pp. 177-185 - issn: 0002-9297 - wos: WOS:000358189500016 (100) - scopus: 2-s2.0-84937522764 (113)

11573/789228 - 2015 - Molecular mechanism of pdxr - a transcriptional activator involved in the regulation of vitamin b biosynthesis in the probiotic bacterium Bacillus clausii
Tramonti, Angela; Fiascarelli, Alessio; Milano, Teresa; Di Salvo, Martino Luigi; Nogués, Isabel; Pascarella, Stefano; Contestabile, Roberto - 01a Articolo in rivista
rivista: THE FEBS JOURNAL (Blackwell Pub., Oxford, UK) pp. 2966-2984 - issn: 1742-464X - wos: WOS:000358840500012 (30) - scopus: 2-s2.0-84938207951 (31)

11573/610586 - 2014 - Cofactor binding as protein stability determinant in psychrophilic SHMT
Angelaccio, Sebastiana; Angela Di, Bello; Pascarella, Stefano - 04a Atto di comunicazione a congresso
congresso: 10th International Conference on Protein Stabilisation (Stresa (Lake Maggiore, Italy))

11573/625133 - 2014 - Structural stability of cold-adapted serine hydroxymethyltransferase, a tool for ß-hydroxy-α-amino acid biosynthesis
Angelaccio, Sebastiana; Di Salvo, Martino Luigi; Parroni, Alessia; A., Di Bello; Contestabile, Roberto; Pascarella, Stefano - 01a Articolo in rivista
rivista: JOURNAL OF MOLECULAR CATALYSIS. B, ENZYMATIC ([S.l.] : Elsevier Science) pp. 171-177 - issn: 1873-3158 - wos: WOS:000345648500024 (3) - scopus: 2-s2.0-84911868629 (3)

11573/587443 - 2014 - Conformational transitions driven by PLP uptake in the psychrophilic serine hydroxymethyltransferase from Psychromonas ingrahamii
Angelaccio, Sebastiana; F., Dworkowski; A. D., Bello; Milano, Teresa; G., Capitani; Pascarella, Stefano - 01a Articolo in rivista
rivista: PROTEINS (New York, NY : John Wiley & Sons) pp. 2831-2841 - issn: 1097-0134 - wos: WOS:000342849400045 (15) - scopus: 2-s2.0-84911937378 (15)

11573/584180 - 2014 - Transcription factors of the MocR family: in silico comparative analysis
Milano, Teresa; Pascarella, Stefano - 04d Abstract in atti di convegno
congresso: BITS annual meeting 2014 (Roma)
libro: BITS 2014 Abstract book - ()

11573/542045 - 2014 - The phytotoxin fusicoccin differently regulates 14-3-3 proteins association to mode III targets.
Paiardini, Alessandro; P., Aducci; Cervoni, Laura; Cutruzzola', Francesca; C. D., Lucente; Janson, Giacomo; Pascarella, Stefano; Rinaldo, Serena; S., Visconti; L., Camoni - 01a Articolo in rivista
rivista: IUBMB LIFE (Taylor & Francis Limited:Rankine Road, Basingstoke RG24 8PR United Kingdom:011 44 1256 813035, EMAIL: madeline.sims@tandf.co.uk, info@tandf.co.uk, INTERNET: http://www.tandf.co.uk, Fax: 011 44 1256 330245) pp. 52-62 - issn: 1521-6543 - wos: WOS:000331299000008 (24) - scopus: 2-s2.0-84893774983 (24)

11573/778149 - 2014 - PdxR: a Pyridoxal 5’-Phosphate-Dependent Transcriptional Regulator Involved in the Control of PLP Biosynthesis
Roberto, Contestabile; Angela, Tramonti; Alessio, Fiascarelli; Milano, Teresa; Alessia, Parroni; Isabel, Noguès; Di Salvo, Martino Luigi; Pascarella, Stefano - 04a Atto di comunicazione a congresso
congresso: Fourth International Conference on Cofactors (ICC-04) (Parma (Italy))

11573/528747 - 2013 - Type I pyridoxal 5'-phosphate dependent enzymatic domains embedded within multimodular nonribosomal peptide synthetase and polyketide synthase assembly lines.
Milano, Teresa; Paiardini, Alessandro; Grgurina, Ingeborg; Pascarella, Stefano - 01a Articolo in rivista
rivista: BMC STRUCTURAL BIOLOGY (London: BioMed Central.) pp. 1-31 - issn: 1472-6807 - wos: WOS:000329231800001 (16) - scopus: 2-s2.0-84885991881 (18)

11573/515471 - 2013 - Structural mimicry between SLA/LP and Rickettsia surface antigens as a driver of autoimmune hepatitis: insights from an in silico study
Paiardini, Alessandro; Pascarella, Stefano - 01a Articolo in rivista
rivista: THEORETICAL BIOLOGY AND MEDICAL MODELLING (London : BioMed Central, 2004-) pp. 25- - issn: 1742-4682 - wos: WOS:000318074400001 (11) - scopus: 2-s2.0-84875956630 (16)

11573/434272 - 2013 - Chemogenomics of pyridoxal 5'-phosphate dependent enzymes.
Singh, R; Spyrakis, F; Cozzini, P; Paiardini, Alessandro; Pascarella, Stefano; Mozzarelli, A. - 01a Articolo in rivista
rivista: JOURNAL OF ENZYME INHIBITION AND MEDICINAL CHEMISTRY (Taylor & Francis Limited:Rankine Road, Basingstoke RG24 8PR United Kingdom:011 44 1256 813035, EMAIL: madeline.sims@tandf.co.uk, info@tandf.co.uk, INTERNET: http://www.tandf.co.uk, Fax: 011 44 1256 330245) pp. 183-194 - issn: 1475-6366 - wos: WOS:000313663400023 (12) - scopus: 2-s2.0-84874162455 (11)

11573/433723 - 2012 - Serine Hydroxymethyltransferase from the Cold Adapted Microorganism Psychromonas ingrahamii: A Low Temperature Active Enzyme with Broad Substrate Specificity
Angelaccio, Sebastiana; Florio, Rita; Consalvi, Valerio; Guido, Festa; Pascarella, Stefano - 01a Articolo in rivista
rivista: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (Basel (Matthaeustrasse 11) : Molecular Diversity Preservation International MDPI) pp. 1314-1326 - issn: 1661-6596 - wos: WOS:000300715700004 (20) - scopus: 2-s2.0-84857684388 (23)

11573/446775 - 2012 - PyMod: sequence similarity searches, multiple sequence-structure alignments, and homology modeling within PyMOL
Bramucci, Emanuele; Paiardini, Alessandro; Bossa, Francesco; Pascarella, Stefano - 01a Articolo in rivista
rivista: BMC BIOINFORMATICS ([London]: BioMed Central, [2000]-) pp. S2- - issn: 1471-2105 - wos: WOS:000303936400003 (136) - scopus: 2-s2.0-84864192056 (144)
congresso: 8th Annual Meeting of the Italian-Society-of-Bioinformatics (BITS) (Pisa, ITALY)

11573/499750 - 2012 - Insight into the structure-function relationship of the nonheme iron halogenases involved in the biosynthesis of 4-chlorothreonine-Thr3 from Streptomyces sp OH-5093 and SyrB2 from Pseudomonas syringae pv. syringae B301DR
Fullone, Maria Rosaria; Paiardini, Alessandro; Miele, Rossella; Marsango, Sara; Dennis C., Gross; Satoshi, Omura; Enric Ros, Herrera; Bonaccorsi Di Patti, Maria Carmela; Lagana', Aldo; Pascarella, Stefano; Grgurina, Ingeborg - 01a Articolo in rivista
rivista: THE FEBS JOURNAL (Blackwell Pub., Oxford, UK) pp. 4269-4282 - issn: 1742-464X - wos: WOS:000311432900002 (14) - scopus: 2-s2.0-84870062977 (14)

11573/428378 - 2011 - Genomic distribution and heterogeneity of MocR-like transcriptional factors containing a domain belonging to the superfamily of the pyridoxal-5'-phosphate dependent enzymes of fold type I.
Bramucci, Emanuele; Milano, Teresa; Pascarella, Stefano - 01a Articolo in rivista
rivista: BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (San Diego [etc.]: Elsevier [etc.]) pp. 88-93 - issn: 0006-291X - wos: WOS:000297385000015 (43) - scopus: 2-s2.0-80755188947 (44)

11573/406527 - 2011 - PyMod: a tool for the analysis of protein structures and sequences in PyMOL
Bramucci, Emanuele; Paiardini, Alessandro; Pascarella, Stefano - 04d Abstract in atti di convegno
congresso: BITS Annual meeting 2011 (Pisa)

11573/224845 - 2011 - Bioinformatica: dalla sequenza alla struttura delle proteine
Pascarella, Stefano; Paiardini, Alessandro - 03a Saggio, Trattato Scientifico

11573/406542 - 2011 - Structural adaptation of enzymes from halophilic organisms
Siglioccolo, Alessandro; Paiardini, Alessandro; M., Piscitelli; Pascarella, Stefano - 04d Abstract in atti di convegno
congresso: BITS annual meeting 2011 (Pisa)

11573/433699 - 2011 - Structural adaptation of extreme halophilic proteins through decrease of conserved hydrophobic contact surface
Siglioccolo, Alessandro; Paiardini, Alessandro; Maria, Piscitelli; Pascarella, Stefano - 01a Articolo in rivista
rivista: BMC STRUCTURAL BIOLOGY (London: BioMed Central.) pp. 50- - issn: 1472-6807 - wos: WOS:000301202900001 (112) - scopus: 2-s2.0-84055213697 (121)

11573/389445 - 2010 - COMPUTER-AIDED DRUG DESIGN OF COMPETITIVE INHIBITORS OF L-DOPA-DECARBOXYLASE, A TARGET FOR THE TREATMENT OF PARKINSON'S DISEASE
F., Daidone; R., Montioli; Paiardini, Alessandro; A., Macchiarulo; Pascarella, Stefano; R., Pellicciari; C., Voltattorni; F., Bossa - 04d Abstract in atti di convegno
congresso: Congresso Proteine 2010 (Parma)

11573/227859 - 2010 - Structural adaptation of serine hydroxymethyltransferase to low temperatures
Siglioccolo, Alessandro; Bossa, Francesco; Pascarella, Stefano - 01a Articolo in rivista
rivista: INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES (-Attuale :ELSEVIER SCIENCE BV, PO BOX 211, AMSTERDAM, NETHERLANDS, 1000 AE -Butterworth Heinemann Publishers:Linacre House Jordan Hill, Oxford OX2 8DP United Kingdom:011 44 1865 314569, EMAIL: bhmarketing@repp.co.uk, INTERNET: http://www.laxtonsprices.co.uk, Fax: 011 44 1865 314569) pp. 37-46 - issn: 0141-8130 - wos: WOS:000274971900006 (15) - scopus: 2-s2.0-71849112061 (16)

11573/50356 - 2010 - "Cold spots" in protein cold adaptation: Insights from normalized atomic displacement parameters (B'-factors)
Siglioccolo, Alessandro; Gerace, R; Pascarella, Stefano - 01a Articolo in rivista
rivista: BIOPHYSICAL CHEMISTRY (Elsevier BV:PO Box 211, 1000 AE Amsterdam Netherlands:011 31 20 4853757, 011 31 20 4853642, 011 31 20 4853641, EMAIL: nlinfo-f@elsevier.nl, INTERNET: http://www.elsevier.nl, Fax: 011 31 20 4853598) pp. 104-114 - issn: 0301-4622 - wos: WOS:000285898400012 (22) - scopus: 2-s2.0-78649732602 (26)

11573/229810 - 2009 - Structural adaptation of the subunit interface of oligomeric thermophilic and hyperthermophilic enzymes
Elisa, Maugini; Tronelli, Daniele; Bossa, Francesco; Pascarella, Stefano - 01a Articolo in rivista
rivista: COMPUTATIONAL BIOLOGY AND CHEMISTRY (Oxford : Elsevier, c2003-) pp. 137-148 - issn: 1476-9271 - wos: WOS:000264582700002 (24) - scopus: 2-s2.0-60549110049 (25)

11573/50292 - 2009 - Subunit interfaces of oligomeric hyperthermophilic enzymes display enhanced compactness
Fulvio, Baldasseroni; Pascarella, Stefano - 01a Articolo in rivista
rivista: INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES (-Attuale :ELSEVIER SCIENCE BV, PO BOX 211, AMSTERDAM, NETHERLANDS, 1000 AE -Butterworth Heinemann Publishers:Linacre House Jordan Hill, Oxford OX2 8DP United Kingdom:011 44 1865 314569, EMAIL: bhmarketing@repp.co.uk, INTERNET: http://www.laxtonsprices.co.uk, Fax: 011 44 1865 314569) pp. 353-360 - issn: 0141-8130 - wos: WOS:000265595300009 (6) - scopus: 2-s2.0-62949116944 (7)

11573/230259 - 2009 - Structural analysis of toxic volkensin, a type 2 ribosome inactivating protein from Adenia volkensii Harm (kilyambiti plant): Molecular modeling and surface analysis by computational methods and limited proteolysis
V., Severino; Paiardini, Alessandro; Pascarella, Stefano; A., Parente; A., Chambery - 01a Articolo in rivista
rivista: INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES (-Attuale :ELSEVIER SCIENCE BV, PO BOX 211, AMSTERDAM, NETHERLANDS, 1000 AE -Butterworth Heinemann Publishers:Linacre House Jordan Hill, Oxford OX2 8DP United Kingdom:011 44 1865 314569, EMAIL: bhmarketing@repp.co.uk, INTERNET: http://www.laxtonsprices.co.uk, Fax: 011 44 1865 314569) pp. 407-413 - issn: 0141-8130 - wos: WOS:000271052400014 (3) - scopus: 2-s2.0-70149106350 (3)

11573/227624 - 2008 - "Hot cores" in proteins: Comparative analysis of the apolar contact area in structures from hyper/thermophilic and mesophilic organisms
Paiardini, Alessandro; Riccardo, Sali; Bossa, Francesco; Pascarella, Stefano - 01a Articolo in rivista
rivista: BMC STRUCTURAL BIOLOGY (London: BioMed Central.) pp. 14-31 - issn: 1472-6807 - wos: WOS:000255177300002 (18) - scopus: 2-s2.0-42149186292 (18)

11573/66904 - 2007 - Biochimica per Studenti di Scienze della vita
Pascarella, Stefano - 06a Curatela

11573/241005 - 2007 - Structural adaptation to low temperature - analysis of the subunit interface of oligomeric psychrophilic enzymes
Tronelli, Daniele; Maugini, E; Bossa, Francesco; Pascarella, Stefano - 01a Articolo in rivista
rivista: THE FEBS JOURNAL (Blackwell Pub., Oxford, UK) pp. 4595-4608 - issn: 1742-464X - wos: WOS:000248964100022 (40) - scopus: 2-s2.0-34548147289 (47)

11573/66561 - 2006 - A consensus procedure improving solvent accessibility prediction
Gianese, Giulio; Pascarella, Stefano - 01a Articolo in rivista
rivista: JOURNAL OF COMPUTATIONAL CHEMISTRY (John Wiley & Sons Incorporated:Customer Service, 111 River Street:Hoboken, NJ 07030:(800)225-5945, (201)748-6000, EMAIL: societyinfo@wiley.com, INTERNET: http://www.wiley.com, Fax: (212)748-6551) pp. 621-626 - issn: 0192-8651 - wos: WOS:000235931800008 (9) - scopus: 2-s2.0-33645312366 (10)

11573/1314736 - 2006 - "Hot cores": comparative analysis of the apolar contact area in structures from hyper/thermophilic and mesophilic organisms
Paiardini, Alessandro; Sali, Riccardo; Pascarella, Stefano - 04d Abstract in atti di convegno
congresso: Proteine 2006 (Novara)
libro: Protyeine 2006: ATTI - ()

11573/1307097 - 2006 - Structural adaptation to low temperatures: analysis of the subunit interface of oligomeric psychrophilic enzymes
Tronelli, Daniele; Gianese, Giulio; Pascarella, Stefano - 04d Abstract in atti di convegno
congresso: BITS 2006 (Bologna; Italy)
libro: BITS 2006: Conference proceedings - ()

11573/239995 - 2005 - In silico analysis of the adenylation domains of the freestanding enzymes belonging to the eucaryotic nonribosomal peptide synthetase-like family
Leonardo Di, Vincenzo; Grgurina, Ingeborg; Pascarella, Stefano - 01a Articolo in rivista
rivista: THE FEBS JOURNAL (Blackwell Pub., Oxford, UK) pp. 929-941 - issn: 1742-464X - wos: WOS:000227359500006 (16) - scopus: 2-s2.0-14044264103 (16)

11573/215241 - 2005 - Structural bases of the molecular recognition between syringomycin synthetase adenylation domains and their amino acid substrates.
P., Giovannini; Pascarella, Stefano; Fullone, Maria Rosaria; D. C., Gross; Grgurina, Ingeborg - 04a Atto di comunicazione a congresso
congresso: 1ST EUROPEAN CONFERENCE ON CHEMISTRY FOR LIFE SCIENCES - Understanding the Chemical Mechanisms of Life (RIMINI, ITALY)
libro: 1ST EUROPEAN CONFERENCE ON CHEMISTRY FOR LIFE SCIENCES - ()

11573/235852 - 2005 - CAMPO, SCR_FIND and CHC_FIND: a suite of web tools for computational structural biology
Paiardini, Alessandro; Bossa, Francesco; Pascarella, Stefano - 01a Articolo in rivista
rivista: NUCLEIC ACIDS RESEARCH (Oxford University Press:Journals Department, Great Clarendon Street, Oxford OX2 6DP United Kingdom:011 44 1865 556767, EMAIL: jnlorders@oup.co.uk, INTERNET: http://www.oup.co.uk, Fax: 011 44 1865 267485 Editore precedente: Information Retrieval ltd., London) pp. 50-55 - issn: 0305-1048 - wos: WOS:000230271400008 (22) - scopus: 2-s2.0-23144434732 (22)

11573/235444 - 2004 - Kinetic properties of native and mutagenized isoforms of mitochondrial alcohol dehydrogenase III purified from Kluyveromyces lactis
Fabrizia, Brisdelli; Saliola, Michele; Pascarella, Stefano; Carla, Luzi; Nicola, Franceschini; Falcone, Claudio; Filippo, Martini; Argante, Bozzi - 01a Articolo in rivista
rivista: BIOCHIMIE (Editions Scientifique & Medical Elsevier:23 Rue Linois, F 75724 Paris Cedex 15 France:011 33 1 71724646, INTERNET: http://www.elsevier.fr, Fax: 011 33 1 71724664) pp. 705-712 - issn: 0300-9084 - wos: WOS:000225621600014 (4) - scopus: 2-s2.0-8844256168 (5)

11573/215866 - 2004 - Computational analysis of structural properties of classical and novel nonribosomal aminoacyl adenylate forming domains
L., Di Vincenzo; Grgurina, Ingeborg; Pascarella, Stefano - 04d Abstract in atti di convegno
congresso: Bioinformatics Italian Society Meeting (PADOVA)

11573/236607 - 2004 - Evolutionarily conserved regions and hydrophobic contacts at the superfamily level: The case of the fold-type I, pyridoxal-5'-phosphate-dependent enzymes
Paiardini, Alessandro; Bossa, Francesco; Pascarella, Stefano - 01a Articolo in rivista
rivista: PROTEIN SCIENCE (Cambridge University Press / New York:40 West 20th Street:New York, NY 10011:(800)872-7423, (212)924-3900, EMAIL: journals_subscriptions@cup.org, INTERNET: http://www.journals.cambridge.org, Fax: (212)691-3239) pp. 2992-3005 - issn: 0961-8368 - wos: WOS:000224762800016 (34) - scopus: 2-s2.0-7244238406 (33)

11573/389987 - 2004 - Structurally conserved regions and hydrophobic contacts in the fold type I, PLP-dependent enzymes
Paiardini, Alessandro; Bossa, Francesco; Pascarella, Stefano - 04c Atto di convegno in rivista
rivista: ITALIAN JOURNAL OF BIOCHEMISTRY (Il Pensiero Scientifico) pp. 18-18 - issn: 0021-2938 - wos: (0) - scopus: (0)
congresso: Proteine 2004 (Viterbo)

11573/66903 - 2004 - Principi di Biochimica
Pascarella, Stefano; Di Salvo, Martino Luigi - 02e Traduzione in volume
libro: Principi di Biochimica - (9788829916931)

11573/253996 - 2003 - Improvement in prediction of solvent accessibility by probability profiles
Gianese, Giulio; Bossa, Francesco; Pascarella, Stefano - 01a Articolo in rivista
rivista: PROTEIN ENGINEERING (Oxford University Press:Journals Department, Great Clarendon Street, Oxford OX2 6DP United Kingdom:011 44 1865 556767, EMAIL: jnlorders@oup.co.uk, INTERNET: http://www.oup.co.uk, Fax: 011 44 1865 267485) pp. 987-992 - issn: 0269-2139 - wos: WOS:000220520400017 (39) - scopus: 2-s2.0-1442310611 (40)

11573/251097 - 2003 - Threonine aldolase and alanine racemase: novel examples of convergent evolution in the superfamily of vitamin B6-dependent enzymes
Paiardini, Alessandro; Contestabile, Roberto; D'aguanno, Simona; Pascarella, Stefano; Bossa, Francesco - 01a Articolo in rivista
rivista: BIOCHIMICA ET BIOPHYSICA ACTA (Elsevier BV:PO Box 211, 1000 AE Amsterdam Netherlands:011 31 20 4853757, 011 31 20 4853642, 011 31 20 4853641, EMAIL: nlinfo-f@elsevier.nl, INTERNET: http://www.elsevier.nl, Fax: 011 31 20 4853598) pp. 214-219 - issn: 0006-3002 - wos: WOS:000182549400037 (27) - scopus: 2-s2.0-0037974655 (31)

11573/406700 - 2003 - Structural plasticity of thermophilic serine hydroxymethyltransferase
Paiardini, Alessandro; Gianese, G.; Bossa, Francesco; Pascarella, Stefano - 04c Atto di convegno in rivista
rivista: PROTEIN SCIENCE (Cambridge University Press / New York:40 West 20th Street:New York, NY 10011:(800)872-7423, (212)924-3900, EMAIL: journals_subscriptions@cup.org, INTERNET: http://www.journals.cambridge.org, Fax: (212)691-3239) pp. 105-105 - issn: 0961-8368 - wos: (0) - scopus: (0)
congresso: Fifth European Symposium of the Protein Society (Firenze)

11573/1307047 - 2003 - Structural plasticity of thermophilic serine hydroxymethyltransferases
Paiardini, Alessandro; Gianese, Giulio; Bossa, Francesco; Pascarella, Stefano - 04c Atto di convegno in rivista
rivista: ITALIAN JOURNAL OF BIOCHEMISTRY (Il Pensiero Scientifico) pp. 55-55 - issn: 0021-2938 - wos: (0) - scopus: 2-s2.0-0041733553 (3)
congresso: SIB-BIB 2003 (Milano)

11573/254004 - 2003 - Structural plasticity of thermophilic serine hydroxymethyltransferase
Paiardini, Alessandro; Gianese, Giulio; Bossa, Francesco; Pascarella, Stefano - 01a Articolo in rivista
rivista: PROTEINS (John Wiley & Sons Incorporated:Customer Service, 111 River Street:Hoboken, NJ 07030:(800)225-5945, (201)748-6000, EMAIL: societyinfo@wiley.com, INTERNET: http://www.wiley.com, Fax: (212)748-6551) pp. 122-134 - issn: 0887-3585 - wos: WOS:000180131100012 (25) - scopus: 2-s2.0-0037236096 (31)

11573/399901 - 2003 - A strategy for detection of structural conserved regions and contacts in protein superfamilies: application to the PLP-dependent enzymes
Paiardini, Alessandro; L., Di Vincenzo; Bossa, Francesco; Pascarella, Stefano - 04d Abstract in atti di convegno
congresso: European Conference on Computational Biology (Parigi)
libro: Proceeding of the European Conference on Computation Biology in conjunction with the French National Conference on Bioinformatics (JOBIM 2003) - ()

11573/212103 - 2003 - Substrate specificity of syringomycin synthetase adenylation domains.
Pascarella, Stefano; Giovannini, P; Grgurina, Ingeborg - 04b Atto di convegno in volume
congresso: International Conference on Pseudomonas syringae Pathovars and Related Pathogens (Mararea (PZ))
libro: Pseudomonas syringae and Related Pathogens - Biology and Genetic - (9781402012273)

11573/410068 - 2002 - “L-Threonine aldolase, serine hydroxymethyltransferase and fungal alanine racemase. A subgroup of strictly related enzymes specialized for different functions”, in the 3rd International Symposium on Vitamin B6, PQQ, Carbonyl Catalysis and Quinoproteins, Southampton, United Kingdom, 14-19 April 2002.
Contestabile, Roberto; Paiardini, Alessandro; Pascarella, Stefano; Di Salvo, Martino Luigi; D'aguanno, S; Bossa, Francesco - 04a Atto di comunicazione a congresso
congresso: 3rd International Symposium on Vitamin B6, PQQ, Carbonyl Catalysis and Quinoproteins (Southampton, United Kingdom)

11573/251834 - 2002 - Comparative structural analysis of psychrophilic and meso- and thermophilic enzymes
Gianese, Giulio; Bossa, Francesco; Pascarella, Stefano - 01a Articolo in rivista
rivista: PROTEINS (John Wiley & Sons Incorporated:Customer Service, 111 River Street:Hoboken, NJ 07030:(800)225-5945, (201)748-6000, EMAIL: societyinfo@wiley.com, INTERNET: http://www.wiley.com, Fax: (212)748-6551) pp. 236-249 - issn: 0887-3585 - wos: WOS:000174713400014 (136) - scopus: 2-s2.0-0036568335 (141)

11573/212099 - 2002 - The substrate specificity of the syringomycin synthetase adenylation domains
P., Giovannini; Pascarella, Stefano; Grgurina, Ingeborg - 04d Abstract in atti di convegno
congresso: 6th International Conference on Pseudomonas syringae Pathovars and Related Pathogens (Acquafredda di Maratea (PZ) taly)
libro: 6th International Conference on Pseudomonas syringae Pathovars and Related Pathogens - ()

11573/416176 - 2002 - "In silico" studies of the substrate specificity of the adenylation domains of syringomycin synthetase
P., Giovannini; Pascarella, Stefano; Grgurina, Ingeborg - 04d Abstract in atti di convegno
congresso: 23rd IUPAC International Symposium on the Chemistry of Natural Products (Firenze)
libro: 23rd IUPAC International Symposium on the Chemistry of Natural Products - ()

11573/425093 - 2002 - "In silico" studies of the substrate specificity of the adenylation domains of syringomycin synthetase
P., Giovannini; Pascarella, Stefano; Grgurina, Ingeborg - 04d Abstract in atti di convegno
congresso: 23rd international Symposium on the Chemistry of Natural Products (FLORENCE, ITALY)

11573/1306916 - 2001 - L-threonine aldolase, serine hydroxymethyltransferase and fungal alanine racemase: structural diversity and uniformity in a subgroup of closely related enzymes catalysing different reactions
Contestabile, R.; Paiardini, A.; Pascarella, S.; Bossa, F. - 04c Atto di convegno in rivista
rivista: PROTEIN SCIENCE (Cambridge University Press / New York:40 West 20th Street:New York, NY 10011:(800)872-7423, (212)924-3900, EMAIL: journals_subscriptions@cup.org, INTERNET: http://www.journals.cambridge.org, Fax: (212)691-3239) pp. 145-145 - issn: 0961-8368 - wos: (0) - scopus: (0)
congresso: Fourth European Symposium of the Protein society (Parigi)

11573/248895 - 2001 - L-Threonine aldolase, serine hydroxymethyltransferase and fungal alanine racemase. A subsgroup of strictly related enzymes specialized for different functions
Contestabile, Roberto; Paiardini, Alessandro; Pascarella, Stefano; Di Salvo, Martino Luigi; D'aguanno, Simona; Bossa, Francesco - 01a Articolo in rivista
rivista: EUROPEAN JOURNAL OF BIOCHEMISTRY (Blackwell Science Limited:PO Box 88, Oxford OX2 0NE United Kingdom:011 44 1865 776868, 011 44 1865 206038, EMAIL: journals.cs@blacksci.co.uk, INTERNET: http://www.blackwell-science.com, Fax: 011 44 1865 721205) pp. 6508-6525 - issn: 0014-2956 - wos: WOS:000172788400020 (77) - scopus: 2-s2.0-0035666383 (83)

11573/68483 - 2001 - Selective inhibition of human mast cell tryptase by gabexate mesylate, an antiproteinase drug
Fulvio, Erba; Laura, Fiorucci; Pascarella, Stefano; Enea, Menegatti; Paolo, Ascenzi; Franca, Ascoli - 01a Articolo in rivista
rivista: BIOCHEMICAL PHARMACOLOGY (-Oxford, United Kingdom: Elsevier Science Limited -London ; New York : Pergamon Press, 1958-) pp. 271-276 - issn: 0006-2952 - wos: WOS:000166841200002 (38) - scopus: 2-s2.0-0035253833 (38)

11573/68482 - 2001 - Structural adaptation of enzymes to low temperatures
Gianese, Giulio; Argos, P; Pascarella, Stefano - 01a Articolo in rivista
rivista: PROTEIN ENGINEERING (Oxford University Press:Journals Department, Great Clarendon Street, Oxford OX2 6DP United Kingdom:011 44 1865 556767, EMAIL: jnlorders@oup.co.uk, INTERNET: http://www.oup.co.uk, Fax: 011 44 1865 267485) pp. 141-148 - issn: 0269-2139 - wos: WOS:000168896000001 (89) - scopus: 2-s2.0-0034997442 (103)

11573/399998 - 2001 - Structural adaptation of serine hydroxymethyltransferase to extreme environments
Paiardini, Alessandro; Pascarella, Stefano; Bossa, Francesco - 04d Abstract in atti di convegno
congresso: 4th International Conference on Molecular Structural Biology (Vienna)
libro: Proceeding of the 4th International Conference on Molecular Structural Biology - (9783900554323)

11573/399993 - 2001 - Structural adaptation of enzymes to low temperatures
Pascarella, Stefano; Gianese, Giulio - 04c Atto di convegno in rivista
rivista: PROTEIN SCIENCE (Cambridge University Press / New York:40 West 20th Street:New York, NY 10011:(800)872-7423, (212)924-3900, EMAIL: journals_subscriptions@cup.org, INTERNET: http://www.journals.cambridge.org, Fax: (212)691-3239) pp. 142-142 - issn: 0961-8368 - wos: (0) - scopus: (0)
congresso: Fourth European Symposium of the Protein Society (Parigi)
libro: Fourth European Symposium of the Protein Society - ()

11573/68485 - 2000 - Aspartate aminotransferase from the antarctic bacterium Pseudoalteromonas haloplanktis TAC 125. Cloning, expression, properties, and molecular modelling
Birolo, L; Tutino, Ml; Fontanella, B; Gerday, C; Mainolfi, K; Pascarella, Stefano; Sannia, G; Vinci, F; Marino, G. - 01a Articolo in rivista
rivista: EUROPEAN JOURNAL OF BIOCHEMISTRY (Blackwell Science Limited:PO Box 88, Oxford OX2 0NE United Kingdom:011 44 1865 776868, 011 44 1865 206038, EMAIL: journals.cs@blacksci.co.uk, INTERNET: http://www.blackwell-science.com, Fax: 011 44 1865 721205) pp. 1-14 - issn: 0014-2956 - wos: WOS:000087108400038 (66) - scopus: 2-s2.0-0008298889 (74)

11573/1307035 - 2000 - ADATTAMENTO STRUTTURALE DEGLI ENZIMI ALLE BASSE TEMPERATURE
Gianese, Giulio; Argos, Patrick; Pascarella, Stefano - 04c Atto di convegno in rivista
rivista: ITALIAN JOURNAL OF BIOCHEMISTRY (Il Pensiero Scientifico) pp. 19-19 - issn: 0021-2938 - wos: (0) - scopus: (0)
congresso: Proteine 2000 (Varese)

11573/254464 - 2000 - Characterization of five new low-molecular-mass trypsin inhibitors from white mustard (Sinapis Alba L.) seed
Ruoppolo, M; Amoresano, A; Pucci, P; Pascarella, Stefano; Polticelli, F; Trovato, Maurizio; Menegatti, E; Ascenzi, P. - 01a Articolo in rivista
rivista: EUROPEAN JOURNAL OF BIOCHEMISTRY (Blackwell Science Limited:PO Box 88, Oxford OX2 0NE United Kingdom:011 44 1865 776868, 011 44 1865 206038, EMAIL: journals.cs@blacksci.co.uk, INTERNET: http://www.blackwell-science.com, Fax: 011 44 1865 721205) pp. 6486-6492 - issn: 0014-2956 - wos: WOS:000089885000021 (17) - scopus: 2-s2.0-0033755866 (21)

11573/112567 - 2000 - Structure-function relationships in sorcin, a member of the penta EF-hand family. Interaction of sorcin fragments with the ryanodine receptor and an E.coli model system
Zamparelli, Carlotta; Ilari, Andrea; Verzili, D.; Giangiacomo, L.; Colotti, G.; Pascarella, Stefano; Chiancone, Emilia - 01a Articolo in rivista
rivista: BIOCHEMISTRY (American Chemical Society:1155 Sixteenth Street Northwest:Washington, DC 20036:(800)227-5558, EMAIL: service@acs.org, INTERNET: http://www.pubs.acs.org, Fax: (614)447-3671) pp. 658-666 - issn: 0006-2960 - wos: WOS:000085013100005 (34) - scopus: 2-s2.0-0034142371 (35)

11573/68548 - 1999 - Characterization of low-mass trypsin inhibitor from oil-rape (Brassica napus var. oleifera)
Ascenzi, Paolo; Ruoppolo, M; Amoresano, A; Pucci, P; Consonni, R; Zetta, L; Pascarella, Stefano; Bortolotti, F; Menegatti, E. - 01a Articolo in rivista
rivista: EUROPEAN JOURNAL OF BIOCHEMISTRY (Blackwell Science Limited:PO Box 88, Oxford OX2 0NE United Kingdom:011 44 1865 776868, 011 44 1865 206038, EMAIL: journals.cs@blacksci.co.uk, INTERNET: http://www.blackwell-science.com, Fax: 011 44 1865 721205) pp. 275-284 - issn: 0014-2956 - wos: WOS:000079657800035 (30) - scopus: 2-s2.0-0343948320 (32)

11573/244113 - 1999 - Homology modeling of the multicopper oxidase Fet3 gives new insights in the mechanism of iron transport in yeast
Bonaccorsi Di Patti, Maria Carmela; Pascarella, Stefano; D., Catalucci; Calabrese, Lilia - 01a Articolo in rivista
rivista: PROTEIN ENGINEERING (Oxford University Press:Journals Department, Great Clarendon Street, Oxford OX2 6DP United Kingdom:011 44 1865 556767, EMAIL: jnlorders@oup.co.uk, INTERNET: http://www.oup.co.uk, Fax: 011 44 1865 267485) pp. 895-897 - issn: 0269-2139 - wos: WOS:000084187200001 (21) - scopus: 2-s2.0-0032732549 (23)

11573/68487 - 1999 - T-knot motif revisited
Polticelli, F; Pascarella, Stefano; Bordo, D; Bolognesi, M; Ascenzi, P. - 01a Articolo in rivista
rivista: BIOLOGICAL CHEMISTRY (Walter de Gruyter and Company:Genthinerstrasse 13, D 10785 Berlin Germany:011 49 30 260050, EMAIL: customerservice@deguyter.de, INTERNET: http://www.degruyter.de/, Fax: 011 49 30 26005338) pp. 1247-1250 - issn: 1431-6730 - wos: WOS:000083611400017 (7) - scopus: 2-s2.0-0032727689 (8)

11573/68549 - 1998 - Leech antihemostatic proteins share the T-knot scaffold, a disulfide-reinforced structural motif
P., Ascenzi; M., Bolognesi; D., Catalucci; Pascarella, Stefano; M., Ruoppolo; M., Rizzi - 01a Articolo in rivista
rivista: BIOLOGICAL CHEMISTRY (Walter de Gruyter and Company:Genthinerstrasse 13, D 10785 Berlin Germany:011 49 30 260050, EMAIL: customerservice@deguyter.de, INTERNET: http://www.degruyter.de/, Fax: 011 49 30 26005338) pp. 1387-1389 - issn: 1431-6730 - wos: WOS:000077432900013 (6) - scopus: 2-s2.0-0031764172 (6)

11573/207773 - 1998 - The Structure of Serine Hydroxymethyltransferase as modelled by Homology and validated by Site Directed Mutagenesis
Pascarella, Stefano; Angelaccio, Sebastiana; Contestabile, Roberto; Delle Fratte, S.; Di Salvo, Martino Luigi; Bossa, Francesco - 04a Atto di comunicazione a congresso
libro: Convegno nazionale "Proteine 98" - ()

11573/242011 - 1998 - The structure of serine hydrxymethyltransferase as modeled by homology and validated by site-directed mutagenesis
Pascarella, Stefano; Angelaccio, Sebastiana; Contestabile, Roberto; Delle Fratte, S; Di Salvo, Martino Luigi; Bossa, Francesco - 01a Articolo in rivista
rivista: PROTEIN SCIENCE (Cambridge University Press / New York:40 West 20th Street:New York, NY 10011:(800)872-7423, (212)924-3900, EMAIL: journals_subscriptions@cup.org, INTERNET: http://www.journals.cambridge.org, Fax: (212)691-3239) pp. 1976-1982 - issn: 0961-8368 - wos: WOS:000075955700013 (8) - scopus: 2-s2.0-0031709347 (8)

11573/1307037 - 1998 - THE STRUCTURE OF SERINE HYDROXYMETHYLTRANSFERASE MODELLED BY HOMOLOGY AND VALIDATED BY SITE DIRECTED MUTAGENESIS
Pascarella, Stefano; Angelaccio, Sebastiana; Contestabile, Roberto; Delle Fratte, Sonia; Di Salvo, Martino Luigi; Bossa, Francesco - 04d Abstract in atti di convegno
rivista: ITALIAN BIOCHEMICAL SOCIETY TRANSACTIONS ("MAF servizi") pp. 73-73 - issn: - wos: (0) - scopus: (0)
congresso: Proteine '98 (Genova)
libro: Italian Biochemical Society Transactions (IBST) - ()

11573/68556 - 1998 - Gli alchimisti del duemila
Pascarella, Stefano; Bossa, Francesco - 01a Articolo in rivista
rivista: SAPERE (Edizioni Dedalo SRL:Casella Postale 362, I 70100 Bari Italy:011 39 080 5311413, EMAIL: info@edizionidedalo.it, INTERNET: http://www.edizionidedalo.it, Fax: 011 39 080 5311414) pp. 10-14 - issn: 0036-4681 - wos: (0) - scopus: (0)

11573/244202 - 1998 - Easy method to predict solvent accessibility from multiple protein sequence alignment
Pascarella, Stefano; De Persio, R; Bossa, Francesco; Argos, P. - 01a Articolo in rivista
rivista: PROTEINS (John Wiley & Sons Incorporated:Customer Service, 111 River Street:Hoboken, NJ 07030:(800)225-5945, (201)748-6000, EMAIL: societyinfo@wiley.com, INTERNET: http://www.wiley.com, Fax: (212)748-6551) pp. 190-199 - issn: 0887-3585 - wos: WOS:000075128700005 (32) - scopus: 2-s2.0-0032147008 (35)

11573/242081 - 1998 - Fast-reacting thiols in rat hemoglobin can intercept damaging species in erythrocytes more efficiently than glutathione
Rossi, R; Barra, Donatella; Bellelli, Andrea; Boumis, Giovanna; Canofeni, S; Di Simplicio, P; Lusini, L; Pascarella, Stefano; Amiconi, Gino - 01a Articolo in rivista
rivista: THE JOURNAL OF BIOLOGICAL CHEMISTRY (American Society for Biochemistry and Molecular Biology:9650 Rockville Pike:Bethesda, MD 20814:(301)530-7145, EMAIL: asbmb@asbmb.faseb.org, INTERNET: http://www.faseb.org/asbmb, Fax: (301)571-1824) pp. 19198-19206 - issn: 0021-9258 - wos: WOS:000074974700074 (63) - scopus: 2-s2.0-0032563123 (64)

11573/246836 - 1997 - Stability of aspartate aminotransferase from Sulfolobus solfataricus
M. I., Arnone; L., Birolo; Pascarella, Stefano; M. V., Cubellis; Bossa, Francesco; G., Sannia; G., Marino - 01a Articolo in rivista
rivista: PROTEIN ENGINEERING (Oxford University Press:Journals Department, Great Clarendon Street, Oxford OX2 6DP United Kingdom:011 44 1865 556767, EMAIL: jnlorders@oup.co.uk, INTERNET: http://www.oup.co.uk, Fax: 011 44 1865 267485) pp. 237-248 - issn: 0269-2139 - wos: WOS:A1997WX73600008 (11) - scopus: 2-s2.0-0030953005 (12)

11573/1307040 - 1997 - PREDICTION OF SOLVENT ACCESSIBILITY STATE USING PROTEIN MULTIPLE SEQUENCE ALIGNMENTS
Pascarella, Stefano; De Persio, Roldano; Bossa, Francesco; Argos, Patrick - 04d Abstract in atti di convegno
rivista: ITALIAN BIOCHEMICAL SOCIETY TRANSACTIONS ("MAF servizi") pp. 98-98 - issn: - wos: (0) - scopus: (0)
congresso: Proteine 97 (Ferrara)
libro: Italian Biochemical Society Transactions (IBST) - (88-86154-15-1)

11573/1307152 - 1996 - Stability of Aspartate aminotransferase from Sulfolobus solfataricus: thermodynamic and molecular modelling analysis
Immacolata Arnone, Maria; Birolo, Leila; Pascarella, Stefano; Vittoria Cubellis, Maria; Bossa, Francesco; Sannia, Giovanni; Marino, Gennaro - 04d Abstract in atti di convegno
congresso: XI convegno nazionale Proteine '96 (Siena)
libro: XI Convegno Nazionale Proteine '96: programma e riassunti - ()

11573/245198 - 1996 - BSTI, a trypsin inhibitor from skin secretion of Bombina bombina related to protease inhibitors of nematodes
Mignogna, Giuseppina; Pascarella, Stefano; Wechselberger, C; Hinterleitner, C; Mollay, G; Amiconi, Gino; Barra, Donatella; Kreil, G. - 01a Articolo in rivista
rivista: PROTEIN SCIENCE (Cambridge University Press / New York:40 West 20th Street:New York, NY 10011:(800)872-7423, (212)924-3900, EMAIL: journals_subscriptions@cup.org, INTERNET: http://www.journals.cambridge.org, Fax: (212)691-3239) pp. 357-362 - issn: 0961-8368 - wos: WOS:A1996TU72400020 (67) - scopus: 2-s2.0-0030063710 (70)

11573/481535 - 1996 - Sequenze di proteine e acidi nucleici
Pascarella, Stefano; Bossa, Francesco - 04b Atto di convegno in volume
congresso: XXII Seminario sulla Evoluzione biologica e i grandi problemi della biologia: molecole ed evoluzione (Roma)
libro: XXII seminario sulla Evoluzione biologica e i grandi problemi della biologia: molecole ed evoluzione - ()

11573/1307023 - 1996 - MOLECULAR MODELLING OF SERINE HYDROXYMETHYLTRANSFERASE FROM ESCHERICHIA COLI
Pascarella, Stefano; Bossa, Francesco; Schirch, Verne - 04d Abstract in atti di convegno
congresso: VII Congress on University and Biotechnology Innovation (Genova)
libro: VII CONGRESS ON UNIVERSITY AND BIOTECHNOLOGY INNOVATION - ()

11573/68554 - 1996 - A databank (3D_ALI) collecting related protein sequences and structures
Pascarella, Stefano; Milpeltz, F; Argos, P. - 01a Articolo in rivista
rivista: PROTEIN ENGINEERING (Oxford University Press:Journals Department, Great Clarendon Street, Oxford OX2 6DP United Kingdom:011 44 1865 556767, EMAIL: jnlorders@oup.co.uk, INTERNET: http://www.oup.co.uk, Fax: 011 44 1865 267485) pp. 249-251 - issn: 0269-2139 - wos: WOS:A1996UN04900001 (12) - scopus: 2-s2.0-0029918306 (13)

11573/384161 - 1995 - Active site model for gamma-aminobutyrate aminotransferase explains substrate specificity and inhibitor reactivities
Toney, Md; Pascarella, Stefano; De Biase, Daniela - 01a Articolo in rivista
rivista: PROTEIN SCIENCE (Cambridge University Press / New York:40 West 20th Street:New York, NY 10011:(800)872-7423, (212)924-3900, EMAIL: journals_subscriptions@cup.org, INTERNET: http://www.journals.cambridge.org, Fax: (212)691-3239) pp. 2366-2374 - issn: 0961-8368 - wos: WOS:A1995TE28700015 (21) - scopus: 2-s2.0-0028783806 (28)

11573/1307106 - 1994 - Serine hydroxymethyltransferase: bioinformatics as a support to site-directed mutagenesis experiments
Delle Fratte, Sonia; Pascarella, Stefano; Angelaccio, Sebastiana; Iurescia, Sandra; Contestabile, Roberto; Bossa, Francesco; Schirch, Verne - 04d Abstract in atti di convegno
congresso: 9th Meeting Vitamin B6 and Carbonyl Catalysys and 3rd Symposium PQQ and Quinoproteins (Capri)
libro: 9th Meeting Vitamin B6 and Carbonyl catalysis: Programme and Abstracts - ()

11573/399801 - 1994 - Quantification of secondary structure prediction improvement using distantly related proteins
J. M., Levin; Pascarella, Stefano; P., Argos; J., Garnier - 02a Capitolo o Articolo
libro: PROTEIN STRUCTURE BY DISTANCE ANALYSIS - (9789051991611)

11573/1307101 - 1994 - Similiarity between PLP/PMP dependent enzymes involved in dideoxy- and deoxyaminosugar biosynthesis and other PLP dependent enzymes
Pascarella, Stefano; Bossa, Francesco - 04d Abstract in atti di convegno
congresso: 9th Meeting Vitamin B6 and Carbonyl Catalysys and 3rd Symposium PQQ and Quinoproteins (Capri)
libro: 9th Meeting Vitamin B6 and Carbonyl catalysis: Programme and Abstracts - ()

11573/384195 - 1994 - Similarity between pyridoxal/pyridoxamine phosphate-dependent enzymes involved in dideoxy and deoxyaminosugar biosynthesis and other pyridoxal phosphate enzymes.
Pascarella, Stefano; Bossa, Francesco - 01a Articolo in rivista
rivista: PROTEIN SCIENCE (Cambridge University Press / New York:40 West 20th Street:New York, NY 10011:(800)872-7423, (212)924-3900, EMAIL: journals_subscriptions@cup.org, INTERNET: http://www.journals.cambridge.org, Fax: (212)691-3239) pp. 701-705 - issn: 0961-8368 - wos: WOS:A1994NG25300018 (14) - scopus: 2-s2.0-0028280498 (13)

11573/398955 - 1994 - Detection of weak structural similarities among PLP dependent enzymes
Pascarella, Stefano; Bossa, Francesco - 04b Atto di convegno in volume
congresso: International meeting on vitamin B6 and carbonyl catalysis (Capri)
libro: Biochemistry of Vitamin B6 and PQQ - (9780817650674; 9783764350673)

11573/384121 - 1994 - CONSERVATION OF AMPHIPATHIC CONFORMATIONS IN MULTIPLE PROTEIN STRUCTURAL ALIGNMENTS
Pascarella, Stefano; Patrick, Argos - 01a Articolo in rivista
rivista: PROTEIN ENGINEERING (Oxford University Press:Journals Department, Great Clarendon Street, Oxford OX2 6DP United Kingdom:011 44 1865 556767, EMAIL: jnlorders@oup.co.uk, INTERNET: http://www.oup.co.uk, Fax: 011 44 1865 267485) pp. 185-193 - issn: 0269-2139 - wos: WOS:A1994MT17700006 (4) - scopus: 2-s2.0-0028174062 (4)

11573/1307062 - 1993 - A BIOINFORMATIC APPROACH TO THE STUDY OF THE MECHANISM OF ACTION OF SERINE HYDROXYMETHYLTRANSFERASE
Angelaccio, Sebastiana; Pascarella, Stefano; Iurescia, Sandra; Delle Fratte, Sonia; Contestabile, Roberto; Bossa, Francesco; Schirch, Verne - 04d Abstract in atti di convegno
congresso: Proteine '93 (Parma)
libro: PROTEIN '93: PROGRAMMI E RIASSUNTI - ()

11573/384122 - 1993 - Quantification of secondary structure prediction improvement using multiple alignments.
J. M., Levin; Pascarella, Stefano; P., Argos; J., Garnier - 01a Articolo in rivista
rivista: PROTEIN ENGINEERING (Oxford University Press:Journals Department, Great Clarendon Street, Oxford OX2 6DP United Kingdom:011 44 1865 556767, EMAIL: jnlorders@oup.co.uk, INTERNET: http://www.oup.co.uk, Fax: 011 44 1865 267485) pp. 849-854 - issn: 0269-2139 - wos: WOS:A1994BA69M00024 (0) - scopus: 2-s2.0-0027489387 (99)

11573/1307985 - 1993 - BIONFORMATICS AS A SUPPORT TO SITE-DIRECTED MUTAGENESIS EXPERIMENTS
Pascarella, Stefano; Angelaccio, Sebastiana; Bossa, Francesco - 04d Abstract in atti di convegno
congresso: IV Congress on University and Biotechnology Innovation (Firenze)
libro: IV CONGRESSON UNIVERSITY AND BIOTECHNOLOGY INNOVATION - ()

11573/384123 - 1993 - Similarity between serine hydroxymethyltransferase and other pyridoxal phosphate-dependent enzymes.
Pascarella, Stefano; V., Schirch; Bossa, Francesco - 01a Articolo in rivista
rivista: FEBS LETTERS (Elsevier BV:PO Box 211, 1000 AE Amsterdam Netherlands:011 31 20 4853757, 011 31 20 4853642, 011 31 20 4853641, EMAIL: nlinfo-f@elsevier.nl, INTERNET: http://www.elsevier.nl, Fax: 011 31 20 4853598) pp. 145-149 - issn: 0014-5793 - wos: WOS:A1993LZ25100030 (30) - scopus: 2-s2.0-0027366667 (30)

11573/114005 - 1992 - Serine hydroxymethyltransferase: origin of substrate specificity
Angelaccio, Sebastiana; Pascarella, Stefano; E., Fattori; Bossa, Francesco; W., Strong; V., Schirch - 01a Articolo in rivista
rivista: BIOCHEMISTRY (American Chemical Society:1155 Sixteenth Street Northwest:Washington, DC 20036:(800)227-5558, EMAIL: service@acs.org, INTERNET: http://www.pubs.acs.org, Fax: (614)447-3671) pp. 155-162 - issn: 0006-2960 - wos: WOS:A1992GZ43800023 (36) - scopus: 2-s2.0-0026507501 (35)

11573/384124 - 1992 - Analysis of insertions/deletions in protein structures.
Pascarella, Stefano; P., Argos - 01a Articolo in rivista
rivista: JOURNAL OF MOLECULAR BIOLOGY (-LONDON, ENGLAND: ACADEMIC PRESS LTD ELSEVIER SCIENCE LTD, -London; New York: Academic Press.) pp. 461-471 - issn: 0022-2836 - wos: WOS:A1992HL81200015 (200) - scopus: 2-s2.0-0026566796 (216)

11573/384125 - 1992 - A data bank merging related protein structures and sequences.
Pascarella, Stefano; P., Argos - 01a Articolo in rivista
rivista: PROTEIN ENGINEERING (Oxford University Press:Journals Department, Great Clarendon Street, Oxford OX2 6DP United Kingdom:011 44 1865 556767, EMAIL: jnlorders@oup.co.uk, INTERNET: http://www.oup.co.uk, Fax: 011 44 1865 267485) pp. 121-137 - issn: 0269-2139 - wos: WOS:A1992HK94200003 (131) - scopus: 2-s2.0-0026511848 (142)

11573/1307049 - 1991 - ANALYSIS OF A DATABASE OF STRUCTURALLY ALIGNED PROTEIN SEQUENCES: INSERTIONS AND DELETIONS
Pascarella, Stefano; Argos, Patrick - 04d Abstract in atti di convegno
congresso: Proteine '91 (Trieste)
libro: PROTEINE '91: PROGRAMMA E RIASSUNTI - ()

11573/472710 - 1991 - The Origin of Substrate and Reaction Specificity In Serine Hydroxymethyltransferase
V., Schirch; Angelaccio, Sebastiana; Pascarella, Stefano; E., Fattori; Bossa, Francesco; W., Strong; K., Shostak; M., Zamora - 04b Atto di convegno in volume
congresso: 8TH INTERNATIONAL SYMP ON VITAMIN B6 AND CARBONYL CATALYSIS (OSAKA, JAPAN)
libro: ENZYMES DEPENDENT ON PYRIDOXAL PHOSPHATE AND OTHER CARBONYL COMPOUNDS AS COFACTORS - (0080408206)

11573/399627 - 1990 - Site-directed mutagenesis in the study of serine hydroxymethyltransferase
E., Fattori; Angelaccio, Sebastiana; Pascarella, Stefano; Bossa, Francesco; Barra, Donatella; V., Schirch - 01a Articolo in rivista
rivista: ATTI DELLA ACCADEMIA NAZIONALE DEI LINCEI. RENDICONTI LINCEI. MATEMATICA E APPLICAZIONI (Zürich : EMS Publishing House Roma: Accademia nazionale dei Lincei) pp. 229-234 - issn: 1720-0768 - wos: (0) - scopus: 2-s2.0-65749311499 (0)

11573/1307052 - 1990 - An 'amplified' protein' structure data base
Pascarella, Stefano; Argos, Patrick - 04d Abstract in atti di convegno
congresso: Computer Applicatoins in Biosciences (Martinsried)
libro: Computer Application in Biosciences: book of abstract - ()

11573/399763 - 1990 - Computational analysis of protein sequencing data
Pascarella, Stefano; Colosimo, Alfredo; Bossa, Francesco - 02a Capitolo o Articolo
libro: Laboratory Methodology in Biochemistry: amino acid analysis and protein sequencing - (9780849344008)

11573/400000 - 1989 - Studies on structure function relationship of serine hydroxymethyltransferase: an approach by site-directed mutagenesis
Angelaccio, Sebastiana; Pascarella, Stefano; E., Fattori; Barra, Donatella; Bossa, Francesco; V., Schirch - 04d Abstract in atti di convegno
congresso: 19th Meeting of the Federation of European Biochemical Societies (Roma)
libro: Abstract Book - 19th meeting of the Federation of European Biochemical Societies - ()

11573/111856 - 1989 - The primary structure of rabbit liver mitochondrial serine hydroxymethyltrasferase
F., Martini; Maras, Bruno; P., Tanci; Angelaccio, Sebastiana; Pascarella, Stefano; Barra, Donatella; Bossa, Francesco; V., Schirch - 01a Articolo in rivista
rivista: THE JOURNAL OF BIOLOGICAL CHEMISTRY (American Society for Biochemistry and Molecular Biology:9650 Rockville Pike:Bethesda, MD 20814:(301)530-7145, EMAIL: asbmb@asbmb.faseb.org, INTERNET: http://www.faseb.org/asbmb, Fax: (301)571-1824) pp. 8509-8519 - issn: 0021-9258 - wos: WOS:A1989U743800017 (39) - scopus: 2-s2.0-0024400636 (35)

11573/384127 - 1989 - PRONET: a microcomputer program for predicting the secondary structure of proteins with a neural network.
Pascarella, Stefano; Bossa, Francesco - 01a Articolo in rivista
rivista: COMPUTER APPLICATIONS IN THE BIOSCIENCES (Oxford University Press:Journals Department, Great Clarendon Street, Oxford OX2 6DP United Kingdom:011 44 1865 556767, EMAIL: jnlorders@oup.co.uk, INTERNET: http://www.oup.co.uk, Fax: 011 44 1865 267485) pp. 319-320 - issn: 0266-7061 - wos: WOS:A1989AZ12600009 (9) - scopus: 2-s2.0-0024387058 (13)

11573/384129 - 1989 - CLEAVAGE: a microcomputer program for predicting signal sequence cleavage sites.
Pascarella, Stefano; Bossa, Francesco - 01a Articolo in rivista
rivista: COMPUTER APPLICATIONS IN THE BIOSCIENCES (Oxford University Press:Journals Department, Great Clarendon Street, Oxford OX2 6DP United Kingdom:011 44 1865 556767, EMAIL: jnlorders@oup.co.uk, INTERNET: http://www.oup.co.uk, Fax: 011 44 1865 267485) pp. 53-54 - issn: 0266-7061 - wos: WOS:A1989T378400009 (2) - scopus: 2-s2.0-0024498377 (5)

11573/1306907 - 1988 - Structural comparison of serine hydroxymethyltransferase isoenzumes from rat liver
Martini, F.; Maras, B.; Angelaccio, S.; Tanci, F.; Pascarella, S.; Barra, D.; Schirch, V.; Bossa, F. - 04d Abstract in atti di convegno
congresso: Proteine 88 (Napoli)
libro: Programma e riassunti del 3° convegno nazoinale Proteine 88 - ()

11573/1307020 - 1988 - ANALISI COMPUTERIZZATA DI SEQUENZE PROTEICHE
Pascarella, S.; Colosimo, A.; Bossa, F. - 04d Abstract in atti di convegno
congresso: 34° Convegno della Società Italiana di Biochimica (Padova)
libro: 34° Congresso della Società Italiana di Biochimica - Riassunti - ()

11573/1306908 - 1988 - STUDIES ON STRUCTURE-FUNCTION RELATIONSHIP OF SERINE HYDROXYMETHYLTRANSFERASE: AN APPROACH BY SITE-DIRECTED MUTAGENESIS
Pascarella, Stefano; Angelaccio, Sebastiana; Barra, Donatella; Bossa, Francesco; Schirch, Verne - 04d Abstract in atti di convegno
congresso: Proteine 88 (Napoli)
libro: RIASSUNTI PROTEINE 88 - ()

11573/1307511 - 1987 - Primary structure studies on serine hydroxymethyltransferase
Barra, Donatella; Martini, Filippo; Angelaccio, Sebastiana; Pascarella, Stefano; Bossa, Francesco; Schirch, Laverne - 02a Capitolo o Articolo
libro: PROTEINS, Structure and Function - ()

11573/399703 - 1987 - Sequence studies on vitamin B6-dependent enzymes: serine hydroxymethyltransferase and glutamate decarboxylase
Bossa, Francesco; F., Martini; Angelaccio, Sebastiana; Pascarella, Stefano; Maras, Bruno; V., Schirch; Simmaco, Maurizio; R. A., John; Barra, Donatella - 04b Atto di convegno in volume
congresso: International Congress on Chemical and Biological Aspects of Vitamin B6 Catalysis (Turku, Finlandia)
libro: Biochemistry of vitamin B6 - (9780817619428; 9783764319427)

11573/113095 - 1987 - The primary structure of rabbit liver cytosolic serine hydroxymethyltrasferase
F., Martini; Angelaccio, Sebastiana; Pascarella, Stefano; Barra, Donatella; Bossa, Francesco; V., Schirch - 01a Articolo in rivista
rivista: THE JOURNAL OF BIOLOGICAL CHEMISTRY (American Society for Biochemistry and Molecular Biology:9650 Rockville Pike:Bethesda, MD 20814:(301)530-7145, EMAIL: asbmb@asbmb.faseb.org, INTERNET: http://www.faseb.org/asbmb, Fax: (301)571-1824) pp. 5499-5509 - issn: 0021-9258 - wos: WOS:A1987H036600012 (49) - scopus: 2-s2.0-0023664358 (43)

11573/384130 - 1987 - PROTEUS: a suite of programs for prediction of structural features of proteins using an Apple IIe.
Pascarella, Stefano; Bossa, Francesco - 01a Articolo in rivista
rivista: COMPUTER APPLICATIONS IN THE BIOSCIENCES (Oxford University Press:Journals Department, Great Clarendon Street, Oxford OX2 6DP United Kingdom:011 44 1865 556767, EMAIL: jnlorders@oup.co.uk, INTERNET: http://www.oup.co.uk, Fax: 011 44 1865 267485) pp. 325-331 - issn: 0266-7061 - wos: WOS:A1987K678400009 (6) - scopus: 2-s2.0-0023450018 (5)

11573/384131 - 1987 - A SIMPLE MICROCOMPUTER PROGRAM FOR PREDICTING THE SECONDARY STRUCTURE OF PROTEINS
Pascarella, Stefano; Bossa, Francesco - 01a Articolo in rivista
rivista: COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE (Elsevier Science Ireland Limited:PO Box 85, Limerick Ireland:011 353 61 709600, 011 353 61 61944, EMAIL: usinfo-f@elsevier.com, INTERNET: http://www.elsevier.com, Fax: 011 353 61 709114) pp. 207-208 - issn: 0169-2607 - wos: WOS:A1987J007500006 (3) - scopus: 2-s2.0-0023165144 (3)

11573/111857 - 1986 - The complete amino acid sequences of cytosolic and mitochondrial aspartate aminotrasferase from horse hearth, and inferences on evolution of the isoenzymes
S., Doonan; F., Martini; Angelaccio, Sebastiana; Pascarella, Stefano; Barra, Donatella; Bossa, Francesco - 01a Articolo in rivista
rivista: JOURNAL OF MOLECULAR EVOLUTION (Springer-Verlag New York Incorporated:175 Fifth Avenue:New York, NY 10010:(212)460-1500, EMAIL: orders@springer-ny.com, INTERNET: http://www.springer-ny.com, Fax: (212)533-3503) pp. 328-335 - issn: 0022-2844 - wos: WOS:A1986F160000008 (30) - scopus: 2-s2.0-0022965529 (22)

11573/111858 - 1985 - The primary structure of mitochondrial aspartate aminotrasferase from human heart
F., Martini; Angelaccio, Sebastiana; Barra, Donatella; Pascarella, Stefano; Maras, Bruno; S., Doonan; Bossa, Francesco - 01a Articolo in rivista
rivista: BIOCHIMICA ET BIOPHYSICA ACTA (Elsevier BV:PO Box 211, 1000 AE Amsterdam Netherlands:011 31 20 4853757, 011 31 20 4853642, 011 31 20 4853641, EMAIL: nlinfo-f@elsevier.nl, INTERNET: http://www.elsevier.nl, Fax: 011 31 20 4853598) pp. 46-51 - issn: 0006-3002 - wos: WOS:A1985AVM8800006 (26) - scopus: 2-s2.0-0022395372 (23)

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