STEFANO PASCARELLA

Professore ordinario

email: stefano.pascarella@uniroma1.it
telefono: 20998
edificio: CU027
stanza: 216

ESPERIENZA LAVORATIVA

2001-oggi: Professore ordinario BIO/10; Sapienza Università di Roma; Attività di insegnamento e ricerca: Biochimica, Bioinformatica Strutturale
2000-2001: Professore Associato BIO/10; Sapienza Università di Roma; Attività di insegnamento e ricerca: Biochimica, Bioinformatica Strutturale
1991-2000: Ricercatore BIO/10; Sapienza Università di Roma; Attività di insegnamento e ricerca: Biochimica, Bioinformatica strutturale
1990-1991: Post-doc fellow (European Community Fellowship; EMBO Fellowship). EMBL - Heidelberg; divisione Biocomputing. Attività di ricerca: Bioinformatica strutturale
1989 (1 m): Visiting fellow; Dipartimento di Biochimica, Medical College of Virginia, Richmond, Virginia, USA. Attività di ricerca: Biochimica
1985 (3 m): Visiting fellow; Dipartimento di Biochimica, Medical College of Virginia, Richmond, Virginia, U.S.A. Attività di ricerca: Biochimica

ISTRUZIONE E FORMAZIONE
1986-1989: Dottorato di ricerca in Biochimica, Università di Roma, La Sapienza
Progetto: Mutagenesi sito-specifica della serina idrossimetiltransferasi

1984: Laurea in Scienze biologiche, 110/110 e lode, Università di Roma, La Sapienza
Progetto: Determinazione della struttura primaria della SHMT citosolica di coniglio

1978: Maturità classica
Liceo Ginnasio Statale Luciano Manara, Roma, Italia

COMPETENZE PERSONALI
Lingua madre: italiano
Altre lingue:
Ascolto Lettura Parlato Scritto
Inglese B1 C1 B1 B2

ATTIVITÀ ORGANIZZATIVE E DIDATTICHE
- Tutor di studenti laureandi, di dottorato, e post-dottorato
- Co-fondatore e componente del Collegio dei Docenti del Master annuale in Bioinformatica (2001-2016)
- Direttore del Master in Bioinformatica (2010-2016)
- Componente di commissioni Dipartimentali
- Componente del Collegio dei Docenti del Dottorato in Biofisica (fino al 2013)
- Componente del Collegio dei Docenti del Dottorato in Biochimica (dal 2015)
- Docente del Corso di Biochimica (Scienze biologiche)
- Docente del corso di Laboratorio di Bioinformatica (Scienze biologiche)
- Docente del Corso di Bioinformatica (Laurea Magistrale in Biotecnologie e Genomica per l’Industria e l’Ambiente)
- Direttore del Corso Avanzato di Formazione in Bioinformatica, Sapienza, 2022-oggi
- Presidente e componente di commissioni di concorso universitario per Ricercatore e Professore
- Presidente e componente di commissioni di concorso presso enti di ricerca (CNR, ISS)

COMPETENZE TECNICHE e SCIENTIFICHE
- Bioinformatica strutturale; Grafica molecolare; Biologia computazionale
- Programmazione con linguaggi Perl, C e bash scripting. Sistemi operativi: Mac OS-X, Linux, MS Windows. Linguaggio R.

FINANZIAMENTI
- Principal Investigator di progetti di ricerca dell'Università Sapienza;
- Partecipante a progetti di ricerca nazionali (PRIN);
- Partecipante a progetti Cenci-Bolognetti;
- Principal Investigator del PNRA (Progetto Nazionale Ricerca Antartide) 2004 1.8
- Partecipante al "Progetto FILAS 2016 Regione Lazio".
- Responsabile dell'unità di ricerca nel "Consorzio Medulloblastoma" finanziato da LazioInnova (2018-2020).
- Partecipante al consorzio europeo ERDERA sulle malattie rare

ALTRE ATTIVITÀ

- Referee per riviste scientifiche internazionali: AminoAcids; BBA; Bioinformatics; BMC Structural biology; Computational biology and chemistry; Current microbiology; Genome Biology and Evolution; Gene; Interdisciplinary sciences: computational life sciences; J Computer Aided Molecular Design; Microbial genomics; Molecular BioSystems; Plos ONE; Scientific Report; European Journal of Biochemistry; FEBS journal; Comparative Biochemistry and Physiology; Journal of Medical Virology; Virology; Virus research; Frontiers in Bioinformatics
- Componente del comitato di valutazione delle biotecnologie nell'ambito del IV PQ della Commissione europea
- Referente per la valutazione di progetti scientifici (Norvegia, Polonia);
- Referente per la valutazione di progetti nazionali (PRIN)
- Membro del comitato di programma dei convegni BITS2012, BITS2013, BITS2014;
- Editore associato del supplemento BITS di BMC Bioinformatics (2012, 2013, 2014);
- Componente del comitato editoriale di Biochemistry Research International, Wiley
- Componente del comitato editoriale di BioMed Research International, Wiley
- Guest editor del numero speciale Symmetry: "Structural Symmetry and Protein Function" (Simmetria strutturale e funzione delle proteine), MDPI Publishing.
- Membro del Comitato Editoriale di Open Life Sciences, De Gruyter Publishing
- Delegato della Sapienza presso il Consiglio di amministrazione di ELIXIR-IIB (dal 2017).


CONTRIBUTI ORALI SU INVITO

- VI Convegno nazionale "Proteine '91", Trieste
- "Vitamina B6 e catalisi carbonilica", Capri, 22-27 maggio 1994
- Scuola Nazionale di Scienza delle Proteine (Urbino, 5-9 settembre 1994)
- Scuola Nazionale di Scienza delle Proteine (Urbino, 18-22 settembre 1995)
- Scuola di Struttura e Funzione delle Proteine (L'Aquila, 25-27 maggio 2000)
- Corso "Bioinformatica", IST, Genova 1-2 luglio, 2004
- Riunione SIB-BIB 2000 "Biochimica e Biotecnologie", Como, 27-29 giugno 2000
- XVII Convegno Nazionale SIB "Proteine 2004", Viterbo, 20-22 maggio 2004
- Conferenza, Dipartimento di Biotecnologie e Bioscienze - Università degli Studi di Milano "Bicocca", 15 dic. 2004
- Workshop SIB "Biologia Computazionale e di Sistema", Bologna, 28 giugno 2017

SOCIETÁ SCIENTIFICHE

SIB, Società Italiana di Biochimica e Biologia Molecolare

BIBLIOMETRIA

(Scopus, maggio 2024)
H-index = 31
Totale citazioni = 3852
Numero di pubblicazioni = 124

Produzione scientifica

11573/1717461 - 2024 - SARS-CoV-2 uses Spike glycoprotein to control the host's anaerobic metabolism by inhibiting LDHB
Monaco, Vittoria; Iacobucci, Ilaria; Canè, Luisa; Cipollone, Irene; Ferrucci, Veronica; De Antonellis, Pasqualino; Quaranta, Miriana; Pascarella, Stefano; Zollo, Massimo; Monti, Maria - 01a Articolo in rivista
rivista: INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES (-Attuale :ELSEVIER SCIENCE BV, PO BOX 211, AMSTERDAM, NETHERLANDS, 1000 AE -Butterworth Heinemann Publishers:Linacre House Jordan Hill, Oxford OX2 8DP United Kingdom:011 44 1865 314569, EMAIL: bhmarketing@repp.co.uk, INTERNET: http://www.laxtonsprices.co.uk, Fax: 011 44 1865 314569) pp. 1-10 - issn: 0141-8130 - wos: WOS:001301293700001 (0) - scopus: 2-s2.0-85201622794 (0)

11573/1720001 - 2024 - SARS-CoV-2 BA.2.86 Spike: insights into its structure, function, and implications
Quaranta, Miriana; Scarpa, Fabio; Via, Allegra; Ciccozzi, Massimo; Pascarella, Stefano - 04f Poster
congresso: 48th FEBS congress (Milano, Italia)
libro: Integrative structural biology approaches - ()

11573/1720004 - 2024 - SARS-CoV-2 JN.1 Spike: insights into its structure, function, and implications
Quaranta, Miriana; Via, Allegra; Pascarella, Stefano - 04f Poster
congresso: ECCB 2024 (Turku, Finlandia)
libro: Proteins - ()

11573/1680876 - 2023 - SARS-CoV CH.1.1 variant: Genomic and structural insight
Bazzani, Liliana; Imperia, Elena; Scarpa, Fabio; Sanna, Daria; Casu, Marco; Borsetti, Alessandra; Pascarella, Stefano; Petrosillo, Nicola; Cella, Eleonora; Giovanetti, Marta; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: INFECTIOUS DISEASE REPORTS (Basel: MDPI Pavia: PAGEPress) pp. 292-298 - issn: 2036-7449 - wos: WOS:001017257000001 (5) - scopus: 2-s2.0-85163576849 (5)

11573/1673753 - 2023 - Two sides of the same coin: the N-terminal and the receptor binding domains of SARS-CoV-2 Spike
Ciccozzi, Massimo; Pascarella, Stefano - 01m Editorial/Introduzione in rivista
rivista: FUTURE VIROLOGY (London : Future Medicine, 2006-) pp. 75-78 - issn: 1746-0794 - wos: WOS:000944000000001 (3) - scopus: 2-s2.0-85150485943 (3)

11573/1686077 - 2023 - Epidemic history and evolution of an emerging threat of international concern, the severe acute respiratory syndrome coronavirus 2
Giovanetti, Marta; Branda, Francesco; Cella, Eleonora; Scarpa, Fabio; Bazzani, Liliana; Ciccozzi, Alessandra; Slavov, Svetoslav Nanev; Benvenuto, Domenico; Sanna, Daria; Casu, Marco; Santos, Luciane Amorim; Lai, Alessia; Zehender, Giangluglielmo; Caccuri, Francesca; Ianni, Andrea; Caruso, Arnaldo; Maroutti, Antonello; Pascarella, Stefano; Borsetti, Alessandra; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: JOURNAL OF MEDICAL VIROLOGY (-Hoboken, NJ : John Wiley & Sons Incorporated -[New York] Alan R. Liss, 1977-) pp. - - issn: 0146-6615 - wos: WOS:001059179200034 (5) - scopus: 2-s2.0-85166593662 (7)

11573/1690898 - 2023 - IncRna: The R Package for Optimizing lncRNA Identification Processes
Jastrzebski, Jan Pawel; Pascarella, Stefano; Lipka, Aleksandra; Dorocki, Slawomir - 01a Articolo in rivista
rivista: JOURNAL OF COMPUTATIONAL BIOLOGY (Mary Ann Liebert Incorporated:2 Madison Avenue:Larchmont, NY 10538:(914)834-3100, EMAIL: info@liebertpub.com, swilliams@liebertpub.com, INTERNET: http://www.liebertpub.com, Fax: (914)834-3688) pp. 1322-1326 - issn: 1066-5277 - wos: WOS:001106207800001 (1) - scopus: 2-s2.0-85176217020 (1)

11573/1679508 - 2023 - Resources and tools for rare disease variant interpretation
Licata, Luana; Via, Allegra; Turina, Paola; Babbi, Giulia; Benevenuta, Silvia; Carta, Claudio; Casadio, Rita; Cicconardi, Andrea; Facchiano, Angelo; Fariselli, Piero; Giordano, Deborah; Isidori, Federica; Marabotti, Anna; Martelli, Pier Luigi; Pascarella, Stefano; Pinelli, Michele; Pippucci, Tommaso; Russo, Roberta; Savojardo, Castrense; Scafuri, Bernardina; Valeriani, Lucrezia; Capriotti, Emidio - 01a Articolo in rivista
rivista: FRONTIERS IN MOLECULAR BIOSCIENCES (Lausanne : Frontiers Media S.A., 2014-) pp. - - issn: 2296-889X - wos: WOS:001000438900001 (5) - scopus: 2-s2.0-85160058924 (4)

11573/1687104 - 2023 - Integrative genome-based survey of the SARS-CoV-2 Omicron XBB.1.16 variant
Scarpa, Fabio; Azzena, Ilenia; Ciccozzi, Alessandra; Giovanetti, Marta; Locci, Chiara; Casu, Marco; Fiori, Pier Luigi; Borsetti, Alessandra; Cella, Eleonora; Quaranta, Miriana; Pascarella, Stefano; Sanna, Daria; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (Basel: MDPI Center) pp. 13573- - issn: 1422-0067 - wos: WOS:001060646300001 (4) - scopus: 2-s2.0-85170222859 (5)

11573/1676908 - 2023 - Molecular in-depth on the epidemiological expansion of SARS-CoV-2 XBB.1.5
Scarpa, Fabio; Azzena, Ilenia; Locci, Chiara; Casu, Marco; Fiori, Pier Luigi; Ciccozzi, Alessandra; Angeletti, Silvia; Imperia, Elena; Giovanetti, Marta; Maruotti, Antonello; Borsetti, Alessandra; Cauda, Roberto; Cassone, Antonio; Via, Allegra; Pascarella, Stefano; Sanna, Daria; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: MICROORGANISMS (Basel: MDPI) pp. 912- - issn: 2076-2607 - wos: WOS:000977957200001 (11) - scopus: 2-s2.0-85156271815 (11)

11573/1686171 - 2023 - Update on the phylodynamic and genetic variability of Marburg virus
Scarpa, Fabio; Bazzani, Liliana; Giovanetti, Marta; Ciccozzi, Alessandra; Benedetti, Francesca; Zella, Davide; Sanna, Daria; Casu, Marco; Borsetti, Alessandra; Cella, Eleonora; Pascarella, Stefano; Maruotti, Antonello; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: VIRUSES (Basel: MDPI) pp. 1721- - issn: 1999-4915 - wos: WOS:001056054600001 (0) - scopus: 2-s2.0-85168731033 (2)

11573/1676710 - 2023 - Genome-based survey of the SARS-CoV-2 BF.7 variant from Asia
Scarpa, Fabio; Giovanetti, Marta; Azzena, Ilenia; Locci, Chiara; Casu, Marco; Fiori, Pier Luigi; Ciccozzi, Alessandra; Imperia, Elena; Bazzani, Liliana; Borsetti, Alessandra; Maruotti, Antonello; Pascarella, Stefano; Sanna, Daria; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: JOURNAL OF MEDICAL VIROLOGY (-Hoboken, NJ : John Wiley & Sons Incorporated -[New York] Alan R. Liss, 1977-) pp. - - issn: 0146-6615 - wos: WOS:000989594000009 (7) - scopus: 2-s2.0-85152909164 (8)

11573/1673653 - 2023 - Genetic and structural genome-based survey reveals the low potential for epidemiological expansion of the SARS-CoV-2 XBB.1.5 sublineage
Scarpa, Fabio; Imperia, Elena; Azzena, Ilenia; Giovanetti, Marta; Benvenuto, Domenico; Locci, Chiara; Casu, Marco; Fiori, Pier Luigi; Maruotti, Antonello; Ceccarelli, Giancarlo; Borsetti, Alessandra; Caruso, Arnaldo; Cauda, Roberto; Cassone, Antonio; Via, Allegra; Pascarella, Stefano; Sanna, Daria; Ciccozzi, Massimo - 01f Lettera, Nota
rivista: JOURNAL OF INFECTION (Harcourt Publishers Limited:Foots Cray High Street, Sidcup Kent DA14 5HP United Kingdom:011 44 20 83085700, EMAIL: journals@harcourt.com, INTERNET: http://www.harcourt-international.com, Fax: 011 44 20 83085876) pp. - - issn: 0163-4453 - wos: WOS:001000883300001 (7) - scopus: 2-s2.0-85152910788 (8)

11573/1681727 - 2023 - Khosta: a genetic and structural point of view of the forgotten virus
Scarpa, Fabio; Imperia, Elena; Ciccozzi, Alessandra; Pascarella, Stefano; Quaranta, Miriana; Giovanetti, Marta; Borsetti, Alessandra; Petrosillo, Nicola; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: INFECTIOUS DISEASE REPORTS (Basel: MDPI Pavia: PAGEPress) pp. 307-318 - issn: 2036-7449 - wos: WOS:001015080100001 (0) - scopus: 2-s2.0-85163620243 (0)

11573/1685156 - 2023 - SARS-CoV-2 recombinants: genomic comparison between XBF and its parental lineages
Scarpa, Fabio; Locci, Chiara; Azzena, Ilenia; Casu, Marco; Fiori, Pier Luigi; Ciccozzi, Alessandra; Giovanetti, Marta; Quaranta, Miriana; Ceccarelli, Giancarlo; Pascarella, Stefano; Ciccozzi, Massimo; Sanna, Daria - 01a Articolo in rivista
rivista: MICROORGANISMS (Basel: MDPI) pp. 1824- - issn: 2076-2607 - wos: WOS:001036434100001 (6) - scopus: 2-s2.0-85166175166 (5)

11573/1687345 - 2023 - Genetic and structural analyses reveal the low potential of the SARS‐CoV‐2 EG.5 variant
Scarpa, Fabio; Pascarella, Stefano; Ciccozzi, Alessandra; Giovanetti, Marta; Azzena, Ilenia; Locci, Chiara; Casu, Marco; Fiori, Pier Luigi; Quaranta, Miriana; Cella, Eleonora; Sanna, Daria; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: JOURNAL OF MEDICAL VIROLOGY (-Hoboken, NJ : John Wiley & Sons Incorporated -[New York] Alan R. Liss, 1977-) pp. - - issn: 0146-6615 - wos: WOS:001079032200006 (10) - scopus: 2-s2.0-85169649654 (9)

11573/1673793 - 2023 - Genome-based comparison between the recombinant SARS-CoV-2 XBB and its parental lineages
Scarpa, Fabio; Sanna, Daria; Azzena, Ilenia; Casu, Marco; Cossu, Piero; Fiori, Pier Luigi; Benvenuto, Domenico; Imperia, Elena; Giovanetti, Marta; Ceccarelli, Giancarlo; Cauda, Roberto; Cassone, Antonio; Pascarella, Stefano; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: JOURNAL OF MEDICAL VIROLOGY (-Hoboken, NJ : John Wiley & Sons Incorporated -[New York] Alan R. Liss, 1977-) pp. - - issn: 0146-6615 - wos: WOS:000960340500053 (28) - scopus: 2-s2.0-85151167783 (29)

11573/1677669 - 2023 - Avian influenza A H5N1: are we really sure it is a spillover?
Scarpa, Fabio; Sanna, Daria; Giovanetti, Marta; Pascarella, Stefano; Casu, Marco; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: PATHOGENS AND GLOBAL HEALTH (London : Maney Publishing, 2012-) pp. 1-3 - issn: 2047-7724 - wos: WOS:000970552500001 (4) - scopus: 2-s2.0-85152786853 (5)

11573/1628498 - 2022 - SARS-CoV-2 pandemic tracing in Italy highlights lineages with mutational burden in growing subsets
Boccia, Angelo; Tufano, Rossella; Ferrucci, Veronica; Sepe, Leandra; Bianchi, Martina; Pascarella, Stefano; Zollo, Massimo; Paolella, Giovanni - 01a Articolo in rivista
rivista: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (Basel: MDPI Center) pp. 4155- - issn: 1422-0067 - wos: WOS:000786123700001 (2) - scopus: 2-s2.0-85127744823 (4)

11573/1651441 - 2022 - The biological properties of the SARS-CoV-2 Cameroon variant spike: an intermediate between the Alpha and Delta variants
Pascarella, Stefano; Bianchi, Martina; Giovanetti, Marta; Benvenuto, Domenico; Borsetti, Alessandra; Cauda, Roberto; Cassone, Antonio; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: PATHOGENS (Basel : Multidisciplinary Digital Publishing Institute) pp. 814- - issn: 2076-0817 - wos: WOS:000833884600001 (1) - scopus: 2-s2.0-85135624714 (1)

11573/1612072 - 2022 - The SARS-CoV-2 mu variant shouldn't be left aside: it warrants attention for its immuo-escaping ability
Pascarella, Stefano; Bianchi, Martina; Giovanetti, Marta; Narzi, Daniele; Cauda, Roberto; Cassone, Antonio; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: JOURNAL OF MEDICAL VIROLOGY (-Hoboken, NJ : John Wiley & Sons Incorporated -[New York] Alan R. Liss, 1977-) pp. - - issn: 0146-6615 - wos: WOS:000761813000001 (4) - scopus: 2-s2.0-85125365933 (4)

11573/1651825 - 2022 - Peculiar variations of the electrostatic potential of spike protein N-terminal domain associated with the emergence of successive SARS-CoV-2 Omicron lineages
Pascarella, Stefano; Ciccozzi, Massimo; Benvenuto, Domenico; Borsetti, Alessandra; Cauda, Roberto; Cassone, Antonio - 01f Lettera, Nota
rivista: JOURNAL OF INFECTION (Harcourt Publishers Limited:Foots Cray High Street, Sidcup Kent DA14 5HP United Kingdom:011 44 20 83085700, EMAIL: journals@harcourt.com, INTERNET: http://www.harcourt-international.com, Fax: 011 44 20 83085876) pp. - - issn: 0163-4453 - wos: WOS:000911667800021 (8) - scopus: 2-s2.0-85138521065 (8)

11573/1613435 - 2022 - The value of electrostatic potentials of the spike receptor binding and N-terminal domains in addressing transmissibility and infectivity of SARS-CoV-2 variants of concern
Pascarella, Stefano; Ciccozzi, Massimo; Bianchi, Martina; Benvenuto, Domenico; Cauda, Roberto; Cassone, Antonio - 01f Lettera, Nota
rivista: JOURNAL OF INFECTION (Harcourt Publishers Limited:Foots Cray High Street, Sidcup Kent DA14 5HP United Kingdom:011 44 20 83085700, EMAIL: journals@harcourt.com, INTERNET: http://www.harcourt-international.com, Fax: 011 44 20 83085876) pp. - - issn: 0163-4453 - wos: WOS:000799523700002 (15) - scopus: 2-s2.0-85129301316 (13)

11573/1634375 - 2022 - A novel human neutralizing mAb recognizes delta, gamma and omicron variants of SARS-CoV-2 and can be used in combination with sotrovimab
Passariello, Margherita; Ferrucci, Veronica; Sasso, Emanuele; Manna, Lorenzo; Lembo, Rosa Rapuano; Pascarella, Stefano; Fusco, Giovanna; Zambrano, Nicola; Zollo, Massimo; De Lorenzo, Claudia - 01a Articolo in rivista
rivista: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (Basel: MDPI Center) pp. 5556- - issn: 1422-0067 - wos: WOS:000803694800001 (2) - scopus: 2-s2.0-85131609384 (3)

11573/1654252 - 2022 - On the SARS-CoV-2 BA.2.75 variant: A genetic and structural point of view
Scarpa, F; Sanna, D; Azzena, I; Giovanetti, M; Benvenuto, D; Angeletti, S; Ceccarelli, G; Pascarella, S; Casu, M; Fiori, Pl; Ciccozzi, M - 01f Lettera, Nota
rivista: JOURNAL OF MEDICAL VIROLOGY (-Hoboken, NJ : John Wiley & Sons Incorporated -[New York] Alan R. Liss, 1977-) pp. 1-4 - issn: 0146-6615 - wos: WOS:000852298000001 (21) - scopus: 2-s2.0-85137783694 (22)

11573/1661806 - 2022 - Genetic and structural data on the SARS-CoV-2 Omicron BQ.1 variant reveal its low potential for epidemiological expansion
Scarpa, Fabio; Sanna, Daria; Benvenuto, Domenico; Borsetti, Alessandra; Azzena, Ilenia; Casu, Marco; Fiori, Pier Luigi; Giovanetti, Marta; Maruotti, Antonello; Ceccarelli, Giancarlo; Caruso, Arnaldo; Caccuri, Francesca; Cauda, Roberto; Cassone, Antonio; Pascarella, Stefano; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (Basel: MDPI Center) pp. 1-12 - issn: 1422-0067 - wos: WOS:000896526300001 (18) - scopus: 2-s2.0-85143716845 (19)

11573/1518379 - 2021 - The bayesian reconstruction and the evolutionary history of salivirus type 1 and type 2: the worldwide spreading
Angeletti, Silvia; Benvenuto, Domenico; Fogolari, Marta; De Flora, Cecilia; Ceccarelli, Giancarlo; Maida, Ivana; Bazzardi, Riccardo; Spoto, Silvia; Pascarella, Stefano; Mugosa, Boban; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: JOURNAL OF INFECTION IN DEVELOPING COUNTRIES (Sassari : OLoeP (Open Learning on Enteric Pathogens )) pp. 280-288-288 - issn: 1972-2680 - wos: WOS:000631902900016 (0) - scopus: 2-s2.0-85102597678 (0)

11573/1585104 - 2021 - SARS-CoV-2 AY.4.2 variant circulating in Italy: genomic preliminary insight
Angeletti, Silvia; Giovanetti, Marta; Fogolari, Marta; Cella, Eleonora; De Florio, Lucia; Lintas, Carla; Veralli, Roberta; Francesconi, Maria; Caccuri, Francesca; De Cesaris, Marina; De Flora, Cecilia; Ceccarelli, Giancarlo; Spoto, Silvia; Caruso, Arnaldo; Pascarella, Stefano; Riva, Elisabetta; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: JOURNAL OF MEDICAL VIROLOGY (-Hoboken, NJ : John Wiley & Sons Incorporated -[New York] Alan R. Liss, 1977-) pp. - - issn: 0146-6615 - wos: WOS:000719383100001 (11) - scopus: 2-s2.0-85119078595 (11)

11573/1473056 - 2021 - SARS-Cov-2 ORF3a: mutability and function
Bianchi, Martina; Borsetti, Alessandra; Ciccozzi, Massimo; Pascarella, Stefano - 01a Articolo in rivista
rivista: INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES (-Attuale :ELSEVIER SCIENCE BV, PO BOX 211, AMSTERDAM, NETHERLANDS, 1000 AE -Butterworth Heinemann Publishers:Linacre House Jordan Hill, Oxford OX2 8DP United Kingdom:011 44 1865 314569, EMAIL: bhmarketing@repp.co.uk, INTERNET: http://www.laxtonsprices.co.uk, Fax: 011 44 1865 314569) pp. 820-826 - issn: 0141-8130 - wos: WOS:000613921400074 (66) - scopus: 2-s2.0-85098969761 (72)

11573/1522733 - 2021 - SARS-CoV-2 lineages and sub-lineages circulating worldwide: a dynamic overview
Cella, Eleonora; Benedetti, Francesca; Fabris, Silvia; Borsetti, Alessandra; Pezzuto, Aldo; Ciotti, Marco; Pascarella, Stefano; Ceccarelli, Giancarlo; Zella, Davide; Ciccozzi, Massimo; Giovanetti, Marta - 01a Articolo in rivista
rivista: CHEMOTHERAPY (Basel: S. Karger, 1968-) pp. 1-5-5 - issn: 1421-9794 - wos: WOS:000632547300001 (29) - scopus: 2-s2.0-85103316494 (29)

11573/1560469 - 2021 - Long-chain polyphosphates impair SARS-CoV-2 infection and replication
Ferrucci, Veronica; Kong, Dae-Young; Asadzadeh, Fatemeh; Marrone, Laura; Boccia, Angelo; Siciliano, Roberto; Criscuolo, Giuseppina; Anastasio, Camilla; Quarantelli, Fabrizio; Comegna, Marika; Pisano, Ida; Passariello, Margherita; Iacobucci, Ilaria; Monica, Rosa Della; Izzo, Barbara; Cerino, Pellegrino; Fusco, Giovanna; Viscardi, Maurizio; Brandi, Sergio; Pierri, Bianca Maria; Borriello, Giorgia; Tiberio, Claudia; Atripaldi, Luigi; Bianchi, Martina; Paolella, Giovanni; Capoluongo, Ettore; Castaldo, Giuseppe; Chiariotti, Lorenzo; Monti, Maria; De Lorenzo, Claudia; Yun, Kyong-Seop; Pascarella, Stefano; Cheong, Jae-Ho; Kim, Hong-Yeoul; Zollo, Massimo - 01a Articolo in rivista
rivista: SCIENCE SIGNALING () pp. eabe5040- - issn: 1937-9145 - wos: WOS:000675603900002 (25) - scopus: 2-s2.0-85109431828 (26)

11573/1541907 - 2021 - SARS-CoV-2 shifting transmission dynamics and hidden reservoirs potentially limit efficacy of public health interventions in Italy
Giovanetti, Marta; Cella, Eleonora; Benedetti, Francesca; Rife Magalis, Brittany; Fonseca, Vagner; Fabris, Silvia; Campisi, Giovanni; Ciccozzi, Alessandra; Angeletti, Silvia; Borsetti, Alessandra; Tambone, Vittoradolfo; Sagnelli, Caterina; Pascarella, Stefano; Riva, Alberto; Ceccarelli, Giancarlo; Marcello, Alessandro; Azarian, Taj; Wilkinson, Eduan; De Oliveira, Tulio; Alcantara, Luiz Carlos Junior; Cauda, Roberto; Caruso, Arnaldo; Dean, Natalie E; Browne, Cameron; Lourenco, Jose; Salemi, Marco; Zella, Davide; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: COMMUNICATIONS BIOLOGY ([London]: Springer Nature) pp. 489- - issn: 2399-3642 - wos: WOS:000643938500002 (23) - scopus: 2-s2.0-85104775295 (26)

11573/1594316 - 2021 - The electrostatic potential of the Omicron variant spike is higher than in Delta and Delta-plus variants: a hint to higher transmissibility?
Pascarella, Stefano; Ciccozzi, Massimo; Bianchi, Martina; Benvenuto, Domenico; Cauda, Roberto; Cassone, Antonio - 01a Articolo in rivista
rivista: JOURNAL OF MEDICAL VIROLOGY (New York, NY : Wiley-Liss) pp. - - issn: 1096-9071 - wos: WOS:000734477700001 (56) - scopus: 2-s2.0-85121741554 (54)

11573/1580256 - 2021 - Shortening epitopes to survive: the case of SARS-CoV-2 lambda variant
Pascarella, Stefano; Ciccozzi, Massimo; Bianchi, Martina; Benvenuto, Domenico; Giovanetti, Marta; Cauda, Roberto; Cassone, Antonio - 01a Articolo in rivista
rivista: BIOMOLECULES (Basel: MDPI) pp. 1-9 - issn: 2218-273X - wos: WOS:000716966100001 (5) - scopus: 2-s2.0-85116799846 (5)

11573/1562347 - 2021 - SARS-CoV-2 B.1.617 Indian variants: are electrostatic potential changes responsible for a higher transmission rate?
Pascarella, Stefano; Ciccozzi, Massimo; Zella, Davide; Bianchi, Martina; Benetti, Francesca; Benvenuto, Domenico; Broccolo, Francesco; Cauda, Roberto; Caruso, Arnaldo; Angeletti, Silvia; Giovanetti, Marta; Cassone, Antonio - 01a Articolo in rivista
rivista: JOURNAL OF MEDICAL VIROLOGY (-Hoboken, NJ : John Wiley & Sons Incorporated -[New York] Alan R. Liss, 1977-) pp. 6551-6556 - issn: 0146-6615 - wos: WOS:000678554400001 (73) - scopus: 2-s2.0-85111278823 (80)

11573/1537374 - 2021 - The importance of genomic analysis in cracking the Coronavirus pandemic
Zella, Davide; Giovanetti, Marta; Cella, Eleonora; Borsetti, Alessandra; Ciotti, Marco; Ceccarelli, Giancarlo; D'ettorre, Gabriella; Pezzuto, Aldo; Tambone, Vittoradolfo; Campanozzi, Laura; Magheri, Marco; Unali, Francesco; Bianchi, Martina; Benedetti, Francesca; Pascarella, Stefano; Angeletti, Silvia; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: EXPERT REVIEW OF MOLECULAR DIAGNOSTICS (--London, United Kingdom: Expert Reviews Ltd -London : Future Drugs, 2001-) pp. - - issn: 1473-7159 - wos: WOS:000648136300001 (9) - scopus: 2-s2.0-85105127504 (13)

11573/1365140 - 2020 - COVID-2019: the role of the nsp2 and nsp3 in its pathogenesis
Angeletti, Silvia; Benvenuto, Domenico; Bianchi, Martina; Giovanetti, Marta; Pascarella, Stefano; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: JOURNAL OF MEDICAL VIROLOGY (New York, NY : Wiley-Liss) pp. - - issn: 1096-9071 - wos: WOS:000526462000014 (226) - scopus: 2-s2.0-85080113316 (275)

11573/1559645 - 2020 - Evolutionary analysis of SARS-CoV-2: how mutation of Non-Structural Protein 6 (NSP6) could affect viral autophagy
Benvenuto, D.; Angeletti, S.; Giovanetti, M.; Bianchi, M.; Pascarella, S.; Cauda, R.; Ciccozzi, M.; Cassone, A. - 01a Articolo in rivista
rivista: JOURNAL OF INFECTION (Harcourt Publishers Limited:Foots Cray High Street, Sidcup Kent DA14 5HP United Kingdom:011 44 20 83085700, EMAIL: journals@harcourt.com, INTERNET: http://www.harcourt-international.com, Fax: 011 44 20 83085876) pp. e24-e27 - issn: 0163-4453 - wos: WOS:000540819000005 (166) - scopus: 2-s2.0-85083339362 (182)

11573/1407585 - 2020 - Evidence for mutations in SARS-CoV-2 Italian isolates potentially affecting virus transmission
Benvenuto, Domenico; Demir Ayse, Banu; Giovanetti, Marta; Bianchi, Martina; Angeletti, Silvia; Pascarella, Stefano; Cauda, Roberto; Ciccozzi, Massimo; Cassone, Antonio - 01a Articolo in rivista
rivista: JOURNAL OF MEDICAL VIROLOGY (New York, NY : Wiley-Liss) pp. - - issn: 1096-9071 - wos: WOS:000541079500001 (17) - scopus: 2-s2.0-85087152353 (18)

11573/1404870 - 2020 - Sars-cov-2 envelope and membrane proteins: structural differences linked to virus characteristics?
Bianchi, Martina; Benvenuto, Domenico; Giovanetti, Marta; Angeletti, Silvia; Ciccozzi, Massimo; Pascarella, Stefano - 01a Articolo in rivista
rivista: BIOMED RESEARCH INTERNATIONAL ([London]: [Hindawi] Cairo: Hindawi Publishing Corporation) pp. - - issn: 2314-6133 - wos: WOS:000540576700008 (122) - scopus: 2-s2.0-85086857382 (144)

11573/1385176 - 2020 - Response to Ribeiro da Silva et al.,"role of nonstructural proteins in the pathogenesis of sars-cov-2
Ciccozzi, Massimo; Benvenuto, Domenico; Giovanetti, Marta; Bianchi, Martina; Pascarella, Stefano; Angeletti, Silvia - 01f Lettera, Nota
rivista: JOURNAL OF MEDICAL VIROLOGY (-Hoboken, NJ : John Wiley & Sons Incorporated -[New York] Alan R. Liss, 1977-) pp. - - issn: 0146-6615 - wos: WOS:000537005400001 (0) - scopus: 2-s2.0-85083865909 (2)

11573/1384021 - 2020 - Covid-19 outbreak: an overview
Ciotti, Marco; Angeletti, Silvia; Minieri, Marilena; Giovannetti, Marta; Benvenuto, Domenico; Pascarella, Stefano; Sagnelli, Caterina; Bianchi, Martina; Bernardini, Sergio; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: CHEMOTHERAPY (S Karger AG:Allschwilerstrasse 10, CH-4009 Basel Switzerland:011 41 61 3061111, EMAIL: orders@karger.ch, INTERNET: http://www.karger.com, Fax: 011 41 61 3061234) pp. 1-9-9 - issn: 0009-3157 - wos: WOS:000547517300001 (228) - scopus: 2-s2.0-85083169416 (260)

11573/1392843 - 2020 - Molecular dynamics of an asymmetric form of GabR, a bacterial transcriptional regulator
Frezzini, Mario; Narzi, Daniele; Maria Sciolari, Assia; Guidoni, Leonardo; Pascarella, Stefano - 01a Articolo in rivista
rivista: BIOPHYSICAL CHEMISTRY (Elsevier BV:PO Box 211, 1000 AE Amsterdam Netherlands:011 31 20 4853757, 011 31 20 4853642, 011 31 20 4853641, EMAIL: nlinfo-f@elsevier.nl, INTERNET: http://www.elsevier.nl, Fax: 011 31 20 4853598) pp. - - issn: 0301-4622 - wos: WOS:000534365400002 (4) - scopus: 2-s2.0-85084345742 (4)

11573/1381863 - 2020 - Interaction of Bacillus subtilis GabR with the gabTD promoter: role of repeated sequences and effect of GABA in transcriptional activation
Nardella, C.; Barile, A.; Di Salvo, M. L.; Milano, T.; Pascarella, S.; Tramonti, A.; Contestabile, R. - 01a Articolo in rivista
rivista: THE FEBS JOURNAL (Blackwell Pub., Oxford, UK) pp. - - issn: 1742-464X - wos: WOS:000520859400001 (8) - scopus: 2-s2.0-85082088243 (8)

11573/1448014 - 2020 - Structural analysis of merkel cell polyomavirus (MCPyV) viral capsid protein 1 (VP1) in HIV-1 infected individuals
Prezioso, Carla; Bianchi, Martina; Obregon, Francisco; Ciotti, Marco; Sarmati, Loredana; Andreoni, Massimo; Palamara, Anna Teresa; Pascarella, Stefano; Moens, Ugo; Pietropaolo, Valeria Antonietta - 01a Articolo in rivista
rivista: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (Basel (Matthaeustrasse 11) : Molecular Diversity Preservation International MDPI) pp. - - issn: 1661-6596 - wos: WOS:000589166400001 (11) - scopus: 2-s2.0-85094982386 (10)

11573/1326675 - 2019 - In silico identification of structural signatures in Arabidopsis thaliana pectin methylesterases
Bellincampi, Daniela; Andrea, Casciano; Del Corpo, Daniele; Lionetti, Vincenzo; Pascarella, Stefano - 04d Abstract in atti di convegno
congresso: 11th congress of the italian society of plant biology (Padova)
libro: SIBV - Abstract Book - ()

11573/1275113 - 2019 - Phylogeny of culex theileri virus flavivirus in Spain, Myanmar, Portugal and Turkey
Cella, Eleonora; Benvenuto, Domenico; Donati, Daniele; Garilli, Francesco; Angeletti, Silvia; Pascarella, Stefano; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: ASIAN PACIFIC JOURNAL OF TROPICAL MEDICINE (OXFORD, ENGLAND, : ELSEVIER SCI LTD, >Haikou, Hainan province China: Hainan Medical College.) pp. 216-223 - issn: 1995-7645 - wos: WOS:000470899600003 (3) - scopus: 2-s2.0-85067110699 (3)

11573/1313522 - 2019 - Atomistic simulations of GabR transcription factor at microsecond scale
Frezzini, Mario; Francescato, Fabio; Maria Sciolari, Assia; Narzi, Daniele; Guidoni, Leonardo; Pascarella, Stefano - 04d Abstract in atti di convegno
congresso: Biophysics@Rome2019 (Roma)
libro: Biophysics@Rome2019 Poster program - ()

11573/1340439 - 2019 - Conformational transitions induced by γ-amino butyrate binding in GabR, a bacterial transcriptional regulator
Frezzini, Mario; Guidoni, Leonardo; Pascarella, Stefano - 01a Articolo in rivista
rivista: SCIENTIFIC REPORTS (London: Springer Nature London: Nature Publishing Group) pp. 19319- - issn: 2045-2322 - wos: WOS:000503213000003 (7) - scopus: 2-s2.0-85076518957 (7)

11573/1268668 - 2019 - Computational classification of MocR transcriptional regulators into subgroups as a support for experimental and functional characterization
Pascarella, Stefano - 01a Articolo in rivista
rivista: BIOINFORMATION (Chennai : Biomedical Informatics Pvt. Ltd.) pp. 151-159 - issn: 0973-8894 - wos: WOS:000481417400010 (3) - scopus: (0)

11573/1179191 - 2018 - Multi-drug resistant Pseudomonas aeruginosa nosocomial strains: Molecular epidemiology and evolution
Angeletti, Silvia; Cella, Eleonora; Prosperi, Mattia; Spoto, Silvia; Fogolari, Marta; De Florio, Lucia; Antonelli, Francesca; Dedej, Etleva; De Flora, Cecilia; Ferraro, Elisabetta; Incalzi, Raffaele Antonelli; Coppola, Roberto; Dicuonzo, Giordano; Francescato, Fabio; Pascarella, Stefano; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: MICROBIAL PATHOGENESIS (Elsevier Science Limited:Oxford Fulfillment Center, PO Box 800, Kidlington Oxford OX5 1DX United Kingdom:011 44 1865 843000, 011 44 1865 843699, EMAIL: asianfo@elsevier.com, tcb@elsevier.co.UK, INTERNET: http://www.elsevier.com, http://www.elsevier.com/locate/shpsa/, Fax: 011 44 1865 843010) pp. 233-241 - issn: 0882-4010 - wos: WOS:000452578500036 (25) - scopus: 2-s2.0-85050135287 (25)

11573/1113025 - 2018 - Mayaro virus infection, the next epidemic wave after Zika? Evolutionary and structural analysis
Cella, Eleonora; Giovanetti, Marta; Milano, Teresa; Fogolari, Marta; Garilli, Francesco; Alexiev, Ivailo; Bazzardi, Riccardo; Salemi, Marco; Junior Alcantara, Luiz; Angeletti, Silvia; Pascarella, Stefano; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: ASIAN PACIFIC JOURNAL OF TROPICAL MEDICINE (OXFORD, ENGLAND, : ELSEVIER SCI LTD, >Haikou, Hainan province China: Hainan Medical College.) pp. 194-201 - issn: 1995-7645 - wos: WOS:000428837700003 (2) - scopus: 2-s2.0-85045470334 (2)

11573/1016014 - 2018 - A comprehensive computational analysis of Mycobacterium genomes pinpoints the genes co-occurring with ycze, a membrane protein coding gene under the putative control of a mocr, and predicts its function
Milano, Teresa; Angelaccio, Sebastiana; Tramonti, Angela; Di Salvo, Martino Luigi; Nogues, Isabel; Contestabile, Roberto; Pascarella, Stefano - 01a Articolo in rivista
rivista: INTERDISCIPLINARY SCIENCES: COMPUTATIONAL LIFE SCIENCES (Berlin: Springer) pp. 111-125 - issn: 1913-2751 - wos: WOS:000426823400011 (4) - scopus: 2-s2.0-85042877382 (3)

11573/1179103 - 2018 - The MocR-like transcription factors: pyridoxal 5'-phosphate-dependent regulators of bacterial metabolism
Tramonti, Angela; Nardella, Caterina; Di Salvo, Martino L.; Pascarella, Stefano; Contestabile, Roberto - 01a Articolo in rivista
rivista: THE FEBS JOURNAL (Blackwell Pub., Oxford, UK) pp. - - issn: 1742-464X - wos: WOS:000449688600003 (24) - scopus: 2-s2.0-85050355937 (24)

11573/905296 - 2017 - Study of DNA binding and bending by Bacillus subtilis GabR, a PLP-dependent transcription factor
Amidani, Davide; Tramonti, Angela; Canosa, Andrea Valeria; Campanini, Barbara; Maggi, Stefano; Milano, Teresa; Di Salvo, Martino Luigi; Pascarella, Stefano; Contestabile, Roberto; Bettati, Stefano; Rivetti, Claudio - 01a Articolo in rivista
rivista: BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS (Elsevier BV:PO Box 211, 1000 AE Amsterdam Netherlands:011 31 20 4853757, 011 31 20 4853642, 011 31 20 4853641, EMAIL: nlinfo-f@elsevier.nl, INTERNET: http://www.elsevier.nl, Fax: 011 31 20 4853598) pp. 3474-3489 - issn: 0304-4165 - wos: WOS:000390736300052 (19) - scopus: 2-s2.0-84994410820 (17)

11573/1070623 - 2017 - Molecular dynamics simulation unveils the conformational flexibility of the interdomain linker in the bacterial transcriptional regulator GabR from Bacillus subtilis bound to pyridoxal 5'-phosphate
Milano, Teresa; Gulzar, Adnan; Narzi, Daniele; Guidoni, Leonardo; Pascarella, Stefano - 01a Articolo in rivista
rivista: PLOS ONE (San Francisco, CA : Public Library of Science) pp. e0189270- - issn: 1932-6203 - wos: WOS:000418389500019 (9) - scopus: 2-s2.0-85038954212 (9)

11573/954194 - 2017 - Hepatitis C virus genotype 3A in a population of injecting drug users in Montenegro: Bayesian and evolutionary analysis
Mugosa, B.; Cella, Eleonora; Lai, A; Lo Presti, Alessandra; Blasi, A; Vratnica, Z.; Vujoševic, D; Ebranati, E; Lauševic, D; Guarino, M; Zehender, Gianguglielmo; Milano, Teresa; Pascarella, Stefano; Spoto, S; Angeletti, Silvia; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: ARCHIVES OF VIROLOGY (Springer-Verlag Wien:Sachsenplatz 4-6, PO Box 89, A-1201 Vienna Austria:011 43 1 3302415, EMAIL: springer@springer.co.at, INTERNET: http://link.springer-ny.com, Fax: 011 43 1 3302426) pp. 1-13 - issn: 0304-8608 - wos: WOS:000401119300010 (3) - scopus: 2-s2.0-85012241695 (3)

11573/949738 - 2017 - Salmonella typhimurium PtsJ is a novel MocR-like transcriptional repressor involved in regulating the vitamin B6 salvage pathway
Tramonti, Angela; Milano, Teresa; Nardella, Caterina; Di Salvo, Martino Luigi; Pascarella, Stefano; Contestabile, Roberto - 01a Articolo in rivista
rivista: THE FEBS JOURNAL (Blackwell Pub., Oxford, UK) pp. 466-484 - issn: 1742-464X - wos: WOS:000393601800010 (12) - scopus: 2-s2.0-85008498867 (13)

11573/885203 - 2016 - Data from computational analysis of the peptide linkers in the mocr bacterial transcriptional regulators
Angelaccio, Sebastiana; Milano, Teresa; Tramonti, Angela; Di Salvo, Martino Luigi; Contestabile, Roberto; Pascarella, Stefano - 01a Articolo in rivista
rivista: DATA IN BRIEF (New York : Elsevier Inc.) pp. 292-313 - issn: 2352-3409 - wos: WOS:000453170500046 (6) - scopus: 2-s2.0-85011789751 (6)

11573/954187 - 2016 - Klebsiella pneumoniae blaKPC-3 nosocomial epidemic: Bayesian and evolutionary analysis
Angeletti, S; Lo Presti, A; Cella, Eleonora; Fogolari, M; De Florio, L; Dedej, E; Blasi, A; Milano, Teresa; Pascarella, Stefano; Incalzi, R. A; Coppola, R; Dicuonzo, G; Ciccozzi, M. - 01a Articolo in rivista
rivista: INFECTION GENETICS AND EVOLUTION (Elsevier BV:PO Box 211, 1000 AE Amsterdam Netherlands:011 31 20 4853757, 011 31 20 4853642, 011 31 20 4853641, EMAIL: nlinfo-f@elsevier.nl, INTERNET: http://www.elsevier.nl, Fax: 011 31 20 4853598) pp. 85-93 - issn: 1567-1348 - wos: WOS:000390456000014 (5) - scopus: 2-s2.0-84993967034 (5)

11573/871597 - 2016 - Zika Virus spreading in South America: evolutionary analysis of emerging neutralizing resistant Phe279Ser strains
Giovanetti, Marta; Milano, Teresa; Alcantara, Luiz Carlos; Carcangiu, Laura; Cella, Eleonora; Lai, Alessia; Lo Presti, Alessandra; Pascarella, Stefano; Zehender, Gianguglielmo; Angeletti, Silvia; Ciccozzi, Massimo - 01a Articolo in rivista
rivista: ASIAN PACIFIC JOURNAL OF TROPICAL MEDICINE (OXFORD, ENGLAND, : ELSEVIER SCI LTD, >Haikou, Hainan province China: Hainan Medical College.) pp. 445-452 - issn: 1995-7645 - wos: WOS:000375359100006 (13) - scopus: 2-s2.0-84964316512 (14)

11573/874429 - 2016 - A bioinformatics analysis reveals a group of MocR bacterial transcriptional regulators linked to a family of genes coding for membrane proteins
Milano, Teresa; Angelaccio, Sebastiana; Tramonti, Angela; Di Salvo, Martino Luigi; Contestabile, Roberto; Pascarella, Stefano - 01a Articolo in rivista
rivista: BIOCHEMISTRY RESEARCH INTERNATIONAL (Cairo: Hindawi Publishing Corporation) pp. ...-... - issn: 2090-2247 - wos: WOS:000379482800001 (6) - scopus: 2-s2.0-84982806318 (7)

11573/880467 - 2016 - Structural properties of the linkers connecting the n- and c- terminal domains in the mocr bacterial transcriptional regulators
Milano, Teresa; Angelaccio, Sebastiana; Tramonti, Angela; Di Salvo, Martino Luigi; Contestabile, Roberto; Pascarella, Stefano - 01a Articolo in rivista
rivista: BIOCHIMIE OPEN (Elsevier) pp. 8-18 - issn: 2214-0085 - wos: (0) - scopus: 2-s2.0-84980398163 (10)

11573/780584 - 2015 - On the mechanism of Escherichia coli pyridoxal kinase inhibition by pyridoxal and pyridoxal 5'-phosphate
Di Salvo, Martino Luigi; Nogués, I; Parroni, Alessia; Tramonti, A; Milano, Teresa; Pascarella, Stefano; Contestabile, Roberto - 01a Articolo in rivista
rivista: BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS (Tokyo ; Oxford ; New York ; London ; Amsterdam ; Shannon ; Paris : Elsevier) pp. - - issn: 1570-9639 - wos: WOS:000358466500012 (21) - scopus: 2-s2.0-84937627738 (23)

11573/954202 - 2015 - Preface: bits2014, the annual meeting of the italian society of bioinformatics
Facchiano, A; Angelini, C; Bosotti, R; Guffanti, A; Marabotti, A; Marangoni, R; Pascarella, Stefano; Romano, P; Zanzoni, A; Helmer Citterich, M. - 01a Articolo in rivista
rivista: BMC BIOINFORMATICS ([London]: BioMed Central, [2000]-) pp. - - issn: 1471-2105 - wos: WOS:000367875300001 (0) - scopus: 2-s2.0-84943166246 (0)

11573/785449 - 2015 - The aspartate aminotransferase-like domain of Firmicutes mocr transcriptional regulators
Milano, Teresa; Contestabile, Roberto; Lo Presti, Alessandra; Ciccozzi, Massimo; Pascarella, Stefano - 01a Articolo in rivista
rivista: COMPUTATIONAL BIOLOGY AND CHEMISTRY (Oxford : Elsevier, c2003-) pp. 55-61 - issn: 1476-9271 - wos: WOS:000364897700006 (15) - scopus: 2-s2.0-84930670598 (15)

11573/780481 - 2015 - Conserved water molecules in bacterial serine hydroxymethyltransferases
Milano, Teresa; Di Salvo, Martino Luigi; Angelaccio, Sebastiana; Pascarella, Stefano - 01a Articolo in rivista
rivista: PROTEIN ENGINEERING, DESIGN & SELECTION (Oxford University Press) pp. 415-426 - issn: 1741-0126 - wos: WOS:000362837000012 (4) - scopus: 2-s2.0-84947945579 (3)

11573/787433 - 2015 - Loss-of-function mutations in appl1 in familial diabetes mellitus
Prudente, Sabrina; Jungtrakoon, Prapaporn; Marucci, Antonella; Ludovico, Ornella; Buranasupkajorn, Patinut; Mazza, Tommaso; Hastings, Timothy; Milano, Teresa; Morini, Eleonora; Mercuri, Luana; Bailetti, Diego; Mendonca, Christine; Alberico, Federica; Basile, Giorgio; Romani, Marta; Miccinilli, Elide; Pizzuti, Antonio; Carella, Massimo; Barbetti, Fabrizio; Pascarella, Stefano; Marchetti, Piero; Trischitta, Vincenzo; Di Paola, Rosa; Doria, Alessandro - 01a Articolo in rivista
rivista: AMERICAN JOURNAL OF HUMAN GENETICS (University of Chicago Press:PO Box 37005, Journals Division:Chicago, IL 60637:(877)705-1878, (877)705-1878, (773)753-2247, EMAIL: subscriptions@press.uchicago.edu, INTERNET: http://www.press.uchicago.edu, Fax: (877)705-1879, (773)753-0811) pp. 177-185 - issn: 0002-9297 - wos: WOS:000358189500016 (106) - scopus: 2-s2.0-84937522764 (119)

11573/789228 - 2015 - Molecular mechanism of pdxr - a transcriptional activator involved in the regulation of vitamin b biosynthesis in the probiotic bacterium Bacillus clausii
Tramonti, Angela; Fiascarelli, Alessio; Milano, Teresa; Di Salvo, Martino Luigi; Nogués, Isabel; Pascarella, Stefano; Contestabile, Roberto - 01a Articolo in rivista
rivista: THE FEBS JOURNAL (Blackwell Pub., Oxford, UK) pp. 2966-2984 - issn: 1742-464X - wos: WOS:000358840500012 (30) - scopus: 2-s2.0-84938207951 (31)

11573/610586 - 2014 - Cofactor binding as protein stability determinant in psychrophilic SHMT
Angelaccio, Sebastiana; Angela Di, Bello; Pascarella, Stefano - 04a Atto di comunicazione a congresso
congresso: 10th International Conference on Protein Stabilisation (Stresa (Lake Maggiore, Italy))

11573/625133 - 2014 - Structural stability of cold-adapted serine hydroxymethyltransferase, a tool for ß-hydroxy-α-amino acid biosynthesis
Angelaccio, Sebastiana; Di Salvo, Martino Luigi; Parroni, Alessia; A., Di Bello; Contestabile, Roberto; Pascarella, Stefano - 01a Articolo in rivista
rivista: JOURNAL OF MOLECULAR CATALYSIS. B, ENZYMATIC ([S.l.] : Elsevier Science) pp. 171-177 - issn: 1873-3158 - wos: WOS:000345648500024 (4) - scopus: 2-s2.0-84911868629 (4)

11573/587443 - 2014 - Conformational transitions driven by PLP uptake in the psychrophilic serine hydroxymethyltransferase from Psychromonas ingrahamii
Angelaccio, Sebastiana; F., Dworkowski; A. D., Bello; Milano, Teresa; G., Capitani; Pascarella, Stefano - 01a Articolo in rivista
rivista: PROTEINS (New York, NY : John Wiley & Sons) pp. 2831-2841 - issn: 1097-0134 - wos: WOS:000342849400045 (16) - scopus: 2-s2.0-84911937378 (16)

11573/584180 - 2014 - Transcription factors of the MocR family: in silico comparative analysis
Milano, Teresa; Pascarella, Stefano - 04d Abstract in atti di convegno
congresso: BITS annual meeting 2014 (Roma)
libro: BITS 2014 Abstract book - ()

11573/542045 - 2014 - The phytotoxin fusicoccin differently regulates 14-3-3 proteins association to mode III targets.
Paiardini, Alessandro; P., Aducci; Cervoni, Laura; Cutruzzola', Francesca; C. D., Lucente; Janson, Giacomo; Pascarella, Stefano; Rinaldo, Serena; S., Visconti; L., Camoni - 01a Articolo in rivista
rivista: IUBMB LIFE (Taylor & Francis Limited:Rankine Road, Basingstoke RG24 8PR United Kingdom:011 44 1256 813035, EMAIL: madeline.sims@tandf.co.uk, info@tandf.co.uk, INTERNET: http://www.tandf.co.uk, Fax: 011 44 1256 330245) pp. 52-62 - issn: 1521-6543 - wos: WOS:000331299000008 (24) - scopus: 2-s2.0-84893774983 (24)

11573/778149 - 2014 - PdxR: a Pyridoxal 5’-Phosphate-Dependent Transcriptional Regulator Involved in the Control of PLP Biosynthesis
Roberto, Contestabile; Angela, Tramonti; Alessio, Fiascarelli; Milano, Teresa; Alessia, Parroni; Isabel, Noguès; Di Salvo, Martino Luigi; Pascarella, Stefano - 04a Atto di comunicazione a congresso
congresso: Fourth International Conference on Cofactors (ICC-04) (Parma (Italy))

11573/528747 - 2013 - Type I pyridoxal 5'-phosphate dependent enzymatic domains embedded within multimodular nonribosomal peptide synthetase and polyketide synthase assembly lines.
Milano, Teresa; Paiardini, Alessandro; Grgurina, Ingeborg; Pascarella, Stefano - 01a Articolo in rivista
rivista: BMC STRUCTURAL BIOLOGY (London: BioMed Central.) pp. 1-31 - issn: 1472-6807 - wos: WOS:000329231800001 (17) - scopus: 2-s2.0-84885991881 (19)

11573/515471 - 2013 - Structural mimicry between SLA/LP and Rickettsia surface antigens as a driver of autoimmune hepatitis: insights from an in silico study
Paiardini, Alessandro; Pascarella, Stefano - 01a Articolo in rivista
rivista: THEORETICAL BIOLOGY AND MEDICAL MODELLING (London : BioMed Central, 2004-) pp. 25- - issn: 1742-4682 - wos: WOS:000318074400001 (12) - scopus: 2-s2.0-84875956630 (16)

11573/434272 - 2013 - Chemogenomics of pyridoxal 5'-phosphate dependent enzymes.
Singh, R; Spyrakis, F; Cozzini, P; Paiardini, Alessandro; Pascarella, Stefano; Mozzarelli, A. - 01a Articolo in rivista
rivista: JOURNAL OF ENZYME INHIBITION AND MEDICINAL CHEMISTRY (Taylor & Francis Limited:Rankine Road, Basingstoke RG24 8PR United Kingdom:011 44 1256 813035, EMAIL: madeline.sims@tandf.co.uk, info@tandf.co.uk, INTERNET: http://www.tandf.co.uk, Fax: 011 44 1256 330245) pp. 183-194 - issn: 1475-6366 - wos: WOS:000313663400023 (12) - scopus: 2-s2.0-84874162455 (11)

11573/433723 - 2012 - Serine Hydroxymethyltransferase from the Cold Adapted Microorganism Psychromonas ingrahamii: A Low Temperature Active Enzyme with Broad Substrate Specificity
Angelaccio, Sebastiana; Florio, Rita; Consalvi, Valerio; Guido, Festa; Pascarella, Stefano - 01a Articolo in rivista
rivista: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (Basel (Matthaeustrasse 11) : Molecular Diversity Preservation International MDPI) pp. 1314-1326 - issn: 1661-6596 - wos: WOS:000300715700004 (20) - scopus: 2-s2.0-84857684388 (23)

11573/446775 - 2012 - PyMod: sequence similarity searches, multiple sequence-structure alignments, and homology modeling within PyMOL
Bramucci, Emanuele; Paiardini, Alessandro; Bossa, Francesco; Pascarella, Stefano - 01a Articolo in rivista
rivista: BMC BIOINFORMATICS ([London]: BioMed Central, [2000]-) pp. S2- - issn: 1471-2105 - wos: WOS:000303936400003 (144) - scopus: 2-s2.0-84864192056 (147)
congresso: 8th Annual Meeting of the Italian-Society-of-Bioinformatics (BITS) (Pisa, ITALY)

11573/499750 - 2012 - Insight into the structure-function relationship of the nonheme iron halogenases involved in the biosynthesis of 4-chlorothreonine-Thr3 from Streptomyces sp OH-5093 and SyrB2 from Pseudomonas syringae pv. syringae B301DR
Fullone, Maria Rosaria; Paiardini, Alessandro; Miele, Rossella; Marsango, Sara; Dennis C., Gross; Satoshi, Omura; Enric Ros, Herrera; Bonaccorsi Di Patti, Maria Carmela; Lagana', Aldo; Pascarella, Stefano; Grgurina, Ingeborg - 01a Articolo in rivista
rivista: THE FEBS JOURNAL (Blackwell Pub., Oxford, UK) pp. 4269-4282 - issn: 1742-464X - wos: WOS:000311432900002 (14) - scopus: 2-s2.0-84870062977 (14)

11573/428378 - 2011 - Genomic distribution and heterogeneity of MocR-like transcriptional factors containing a domain belonging to the superfamily of the pyridoxal-5'-phosphate dependent enzymes of fold type I.
Bramucci, Emanuele; Milano, Teresa; Pascarella, Stefano - 01a Articolo in rivista
rivista: BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (San Diego [etc.]: Elsevier [etc.]) pp. 88-93 - issn: 0006-291X - wos: WOS:000297385000015 (43) - scopus: 2-s2.0-80755188947 (44)

11573/406527 - 2011 - PyMod: a tool for the analysis of protein structures and sequences in PyMOL
Bramucci, Emanuele; Paiardini, Alessandro; Pascarella, Stefano - 04d Abstract in atti di convegno
congresso: BITS Annual meeting 2011 (Pisa)

11573/224845 - 2011 - Bioinformatica: dalla sequenza alla struttura delle proteine
Pascarella, Stefano; Paiardini, Alessandro - 03a Saggio, Trattato Scientifico

11573/406542 - 2011 - Structural adaptation of enzymes from halophilic organisms
Siglioccolo, Alessandro; Paiardini, Alessandro; M., Piscitelli; Pascarella, Stefano - 04d Abstract in atti di convegno
congresso: BITS annual meeting 2011 (Pisa)

11573/433699 - 2011 - Structural adaptation of extreme halophilic proteins through decrease of conserved hydrophobic contact surface
Siglioccolo, Alessandro; Paiardini, Alessandro; Maria, Piscitelli; Pascarella, Stefano - 01a Articolo in rivista
rivista: BMC STRUCTURAL BIOLOGY (London: BioMed Central.) pp. 50- - issn: 1472-6807 - wos: WOS:000301202900001 (113) - scopus: 2-s2.0-84055213697 (125)

11573/389445 - 2010 - COMPUTER-AIDED DRUG DESIGN OF COMPETITIVE INHIBITORS OF L-DOPA-DECARBOXYLASE, A TARGET FOR THE TREATMENT OF PARKINSON'S DISEASE
F., Daidone; R., Montioli; Paiardini, Alessandro; A., Macchiarulo; Pascarella, Stefano; R., Pellicciari; C., Voltattorni; F., Bossa - 04d Abstract in atti di convegno
congresso: Congresso Proteine 2010 (Parma)

11573/227859 - 2010 - Structural adaptation of serine hydroxymethyltransferase to low temperatures
Siglioccolo, Alessandro; Bossa, Francesco; Pascarella, Stefano - 01a Articolo in rivista
rivista: INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES (-Attuale :ELSEVIER SCIENCE BV, PO BOX 211, AMSTERDAM, NETHERLANDS, 1000 AE -Butterworth Heinemann Publishers:Linacre House Jordan Hill, Oxford OX2 8DP United Kingdom:011 44 1865 314569, EMAIL: bhmarketing@repp.co.uk, INTERNET: http://www.laxtonsprices.co.uk, Fax: 011 44 1865 314569) pp. 37-46 - issn: 0141-8130 - wos: WOS:000274971900006 (15) - scopus: 2-s2.0-71849112061 (16)

11573/50356 - 2010 - "Cold spots" in protein cold adaptation: Insights from normalized atomic displacement parameters (B'-factors)
Siglioccolo, Alessandro; Gerace, R; Pascarella, Stefano - 01a Articolo in rivista
rivista: BIOPHYSICAL CHEMISTRY (Elsevier BV:PO Box 211, 1000 AE Amsterdam Netherlands:011 31 20 4853757, 011 31 20 4853642, 011 31 20 4853641, EMAIL: nlinfo-f@elsevier.nl, INTERNET: http://www.elsevier.nl, Fax: 011 31 20 4853598) pp. 104-114 - issn: 0301-4622 - wos: WOS:000285898400012 (22) - scopus: 2-s2.0-78649732602 (26)

11573/229810 - 2009 - Structural adaptation of the subunit interface of oligomeric thermophilic and hyperthermophilic enzymes
Elisa, Maugini; Tronelli, Daniele; Bossa, Francesco; Pascarella, Stefano - 01a Articolo in rivista
rivista: COMPUTATIONAL BIOLOGY AND CHEMISTRY (Oxford : Elsevier, c2003-) pp. 137-148 - issn: 1476-9271 - wos: WOS:000264582700002 (24) - scopus: 2-s2.0-60549110049 (25)

11573/50292 - 2009 - Subunit interfaces of oligomeric hyperthermophilic enzymes display enhanced compactness
Fulvio, Baldasseroni; Pascarella, Stefano - 01a Articolo in rivista
rivista: INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES (-Attuale :ELSEVIER SCIENCE BV, PO BOX 211, AMSTERDAM, NETHERLANDS, 1000 AE -Butterworth Heinemann Publishers:Linacre House Jordan Hill, Oxford OX2 8DP United Kingdom:011 44 1865 314569, EMAIL: bhmarketing@repp.co.uk, INTERNET: http://www.laxtonsprices.co.uk, Fax: 011 44 1865 314569) pp. 353-360 - issn: 0141-8130 - wos: WOS:000265595300009 (6) - scopus: 2-s2.0-62949116944 (7)

11573/230259 - 2009 - Structural analysis of toxic volkensin, a type 2 ribosome inactivating protein from Adenia volkensii Harm (kilyambiti plant): Molecular modeling and surface analysis by computational methods and limited proteolysis
V., Severino; Paiardini, Alessandro; Pascarella, Stefano; A., Parente; A., Chambery - 01a Articolo in rivista
rivista: INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES (-Attuale :ELSEVIER SCIENCE BV, PO BOX 211, AMSTERDAM, NETHERLANDS, 1000 AE -Butterworth Heinemann Publishers:Linacre House Jordan Hill, Oxford OX2 8DP United Kingdom:011 44 1865 314569, EMAIL: bhmarketing@repp.co.uk, INTERNET: http://www.laxtonsprices.co.uk, Fax: 011 44 1865 314569) pp. 407-413 - issn: 0141-8130 - wos: WOS:000271052400014 (3) - scopus: 2-s2.0-70149106350 (3)

11573/227624 - 2008 - "Hot cores" in proteins: Comparative analysis of the apolar contact area in structures from hyper/thermophilic and mesophilic organisms
Paiardini, Alessandro; Riccardo, Sali; Bossa, Francesco; Pascarella, Stefano - 01a Articolo in rivista
rivista: BMC STRUCTURAL BIOLOGY (London: BioMed Central.) pp. 14-31 - issn: 1472-6807 - wos: WOS:000255177300002 (18) - scopus: 2-s2.0-42149186292 (18)

11573/66904 - 2007 - Biochimica per Studenti di Scienze della vita
Pascarella, Stefano - 06a Curatela

11573/241005 - 2007 - Structural adaptation to low temperature - analysis of the subunit interface of oligomeric psychrophilic enzymes
Tronelli, Daniele; Maugini, E; Bossa, Francesco; Pascarella, Stefano - 01a Articolo in rivista
rivista: THE FEBS JOURNAL (Blackwell Pub., Oxford, UK) pp. 4595-4608 - issn: 1742-464X - wos: WOS:000248964100022 (41) - scopus: 2-s2.0-34548147289 (49)

11573/66561 - 2006 - A consensus procedure improving solvent accessibility prediction
Gianese, Giulio; Pascarella, Stefano - 01a Articolo in rivista
rivista: JOURNAL OF COMPUTATIONAL CHEMISTRY (John Wiley & Sons Incorporated:Customer Service, 111 River Street:Hoboken, NJ 07030:(800)225-5945, (201)748-6000, EMAIL: societyinfo@wiley.com, INTERNET: http://www.wiley.com, Fax: (212)748-6551) pp. 621-626 - issn: 0192-8651 - wos: WOS:000235931800008 (9) - scopus: 2-s2.0-33645312366 (10)

11573/1314736 - 2006 - "Hot cores": comparative analysis of the apolar contact area in structures from hyper/thermophilic and mesophilic organisms
Paiardini, Alessandro; Sali, Riccardo; Pascarella, Stefano - 04d Abstract in atti di convegno
congresso: Proteine 2006 (Novara)
libro: Protyeine 2006: ATTI - ()

11573/1307097 - 2006 - Structural adaptation to low temperatures: analysis of the subunit interface of oligomeric psychrophilic enzymes
Tronelli, Daniele; Gianese, Giulio; Pascarella, Stefano - 04d Abstract in atti di convegno
congresso: BITS 2006 (Bologna; Italy)
libro: BITS 2006: Conference proceedings - ()

11573/239995 - 2005 - In silico analysis of the adenylation domains of the freestanding enzymes belonging to the eucaryotic nonribosomal peptide synthetase-like family
Leonardo Di, Vincenzo; Grgurina, Ingeborg; Pascarella, Stefano - 01a Articolo in rivista
rivista: THE FEBS JOURNAL (Blackwell Pub., Oxford, UK) pp. 929-941 - issn: 1742-464X - wos: WOS:000227359500006 (16) - scopus: 2-s2.0-14044264103 (16)

11573/215241 - 2005 - Structural bases of the molecular recognition between syringomycin synthetase adenylation domains and their amino acid substrates.
P., Giovannini; Pascarella, Stefano; Fullone, Maria Rosaria; D. C., Gross; Grgurina, Ingeborg - 04a Atto di comunicazione a congresso
congresso: 1ST EUROPEAN CONFERENCE ON CHEMISTRY FOR LIFE SCIENCES - Understanding the Chemical Mechanisms of Life (RIMINI, ITALY)
libro: 1ST EUROPEAN CONFERENCE ON CHEMISTRY FOR LIFE SCIENCES - ()

11573/235852 - 2005 - CAMPO, SCR_FIND and CHC_FIND: a suite of web tools for computational structural biology
Paiardini, Alessandro; Bossa, Francesco; Pascarella, Stefano - 01a Articolo in rivista
rivista: NUCLEIC ACIDS RESEARCH (Oxford University Press:Journals Department, Great Clarendon Street, Oxford OX2 6DP United Kingdom:011 44 1865 556767, EMAIL: jnlorders@oup.co.uk, INTERNET: http://www.oup.co.uk, Fax: 011 44 1865 267485 Editore precedente: Information Retrieval ltd., London) pp. 50-55 - issn: 0305-1048 - wos: WOS:000230271400008 (22) - scopus: 2-s2.0-23144434732 (22)

11573/235444 - 2004 - Kinetic properties of native and mutagenized isoforms of mitochondrial alcohol dehydrogenase III purified from Kluyveromyces lactis
Fabrizia, Brisdelli; Saliola, Michele; Pascarella, Stefano; Carla, Luzi; Nicola, Franceschini; Falcone, Claudio; Filippo, Martini; Argante, Bozzi - 01a Articolo in rivista
rivista: BIOCHIMIE (Editions Scientifique & Medical Elsevier:23 Rue Linois, F 75724 Paris Cedex 15 France:011 33 1 71724646, INTERNET: http://www.elsevier.fr, Fax: 011 33 1 71724664) pp. 705-712 - issn: 0300-9084 - wos: WOS:000225621600014 (4) - scopus: 2-s2.0-8844256168 (5)

11573/215866 - 2004 - Computational analysis of structural properties of classical and novel nonribosomal aminoacyl adenylate forming domains
L., Di Vincenzo; Grgurina, Ingeborg; Pascarella, Stefano - 04d Abstract in atti di convegno
congresso: Bioinformatics Italian Society Meeting (PADOVA)

11573/236607 - 2004 - Evolutionarily conserved regions and hydrophobic contacts at the superfamily level: The case of the fold-type I, pyridoxal-5'-phosphate-dependent enzymes
Paiardini, Alessandro; Bossa, Francesco; Pascarella, Stefano - 01a Articolo in rivista
rivista: PROTEIN SCIENCE (Cambridge University Press / New York:40 West 20th Street:New York, NY 10011:(800)872-7423, (212)924-3900, EMAIL: journals_subscriptions@cup.org, INTERNET: http://www.journals.cambridge.org, Fax: (212)691-3239) pp. 2992-3005 - issn: 0961-8368 - wos: WOS:000224762800016 (34) - scopus: 2-s2.0-7244238406 (33)

11573/389987 - 2004 - Structurally conserved regions and hydrophobic contacts in the fold type I, PLP-dependent enzymes
Paiardini, Alessandro; Bossa, Francesco; Pascarella, Stefano - 04c Atto di convegno in rivista
rivista: ITALIAN JOURNAL OF BIOCHEMISTRY (Il Pensiero Scientifico) pp. 18-18 - issn: 0021-2938 - wos: (0) - scopus: (0)
congresso: Proteine 2004 (Viterbo)

11573/66903 - 2004 - Principi di Biochimica
Pascarella, Stefano; Di Salvo, Martino Luigi - 02e Traduzione in volume
libro: Principi di Biochimica - (9788829916931)

11573/253996 - 2003 - Improvement in prediction of solvent accessibility by probability profiles
Gianese, Giulio; Bossa, Francesco; Pascarella, Stefano - 01a Articolo in rivista
rivista: PROTEIN ENGINEERING (Oxford University Press:Journals Department, Great Clarendon Street, Oxford OX2 6DP United Kingdom:011 44 1865 556767, EMAIL: jnlorders@oup.co.uk, INTERNET: http://www.oup.co.uk, Fax: 011 44 1865 267485) pp. 987-992 - issn: 0269-2139 - wos: WOS:000220520400017 (39) - scopus: 2-s2.0-1442310611 (40)

11573/251097 - 2003 - Threonine aldolase and alanine racemase: novel examples of convergent evolution in the superfamily of vitamin B6-dependent enzymes
Paiardini, Alessandro; Contestabile, Roberto; D'aguanno, Simona; Pascarella, Stefano; Bossa, Francesco - 01a Articolo in rivista
rivista: BIOCHIMICA ET BIOPHYSICA ACTA (Elsevier BV:PO Box 211, 1000 AE Amsterdam Netherlands:011 31 20 4853757, 011 31 20 4853642, 011 31 20 4853641, EMAIL: nlinfo-f@elsevier.nl, INTERNET: http://www.elsevier.nl, Fax: 011 31 20 4853598) pp. 214-219 - issn: 0006-3002 - wos: WOS:000182549400037 (27) - scopus: 2-s2.0-0037974655 (32)

11573/406700 - 2003 - Structural plasticity of thermophilic serine hydroxymethyltransferase
Paiardini, Alessandro; Gianese, G.; Bossa, Francesco; Pascarella, Stefano - 04c Atto di convegno in rivista
rivista: PROTEIN SCIENCE (Cambridge University Press / New York:40 West 20th Street:New York, NY 10011:(800)872-7423, (212)924-3900, EMAIL: journals_subscriptions@cup.org, INTERNET: http://www.journals.cambridge.org, Fax: (212)691-3239) pp. 105-105 - issn: 0961-8368 - wos: (0) - scopus: (0)
congresso: Fifth European Symposium of the Protein Society (Firenze)

11573/1307047 - 2003 - Structural plasticity of thermophilic serine hydroxymethyltransferases
Paiardini, Alessandro; Gianese, Giulio; Bossa, Francesco; Pascarella, Stefano - 04c Atto di convegno in rivista
rivista: ITALIAN JOURNAL OF BIOCHEMISTRY (Il Pensiero Scientifico) pp. 55-55 - issn: 0021-2938 - wos: (0) - scopus: 2-s2.0-0041733553 (3)
congresso: SIB-BIB 2003 (Milano)

11573/254004 - 2003 - Structural plasticity of thermophilic serine hydroxymethyltransferase
Paiardini, Alessandro; Gianese, Giulio; Bossa, Francesco; Pascarella, Stefano - 01a Articolo in rivista
rivista: PROTEINS (John Wiley & Sons Incorporated:Customer Service, 111 River Street:Hoboken, NJ 07030:(800)225-5945, (201)748-6000, EMAIL: societyinfo@wiley.com, INTERNET: http://www.wiley.com, Fax: (212)748-6551) pp. 122-134 - issn: 0887-3585 - wos: WOS:000180131100012 (26) - scopus: 2-s2.0-0037236096 (32)

11573/399901 - 2003 - A strategy for detection of structural conserved regions and contacts in protein superfamilies: application to the PLP-dependent enzymes
Paiardini, Alessandro; L., Di Vincenzo; Bossa, Francesco; Pascarella, Stefano - 04d Abstract in atti di convegno
congresso: European Conference on Computational Biology (Parigi)
libro: Proceeding of the European Conference on Computation Biology in conjunction with the French National Conference on Bioinformatics (JOBIM 2003) - ()

11573/212103 - 2003 - Substrate specificity of syringomycin synthetase adenylation domains.
Pascarella, Stefano; Giovannini, P; Grgurina, Ingeborg - 04b Atto di convegno in volume
congresso: International Conference on Pseudomonas syringae Pathovars and Related Pathogens (Mararea (PZ))
libro: Pseudomonas syringae and Related Pathogens - Biology and Genetic - (9781402012273)

11573/410068 - 2002 - “L-Threonine aldolase, serine hydroxymethyltransferase and fungal alanine racemase. A subgroup of strictly related enzymes specialized for different functions”, in the 3rd International Symposium on Vitamin B6, PQQ, Carbonyl Catalysis and Quinoproteins, Southampton, United Kingdom, 14-19 April 2002.
Contestabile, Roberto; Paiardini, Alessandro; Pascarella, Stefano; Di Salvo, Martino Luigi; D'aguanno, S; Bossa, Francesco - 04a Atto di comunicazione a congresso
congresso: 3rd International Symposium on Vitamin B6, PQQ, Carbonyl Catalysis and Quinoproteins (Southampton, United Kingdom)

11573/251834 - 2002 - Comparative structural analysis of psychrophilic and meso- and thermophilic enzymes
Gianese, Giulio; Bossa, Francesco; Pascarella, Stefano - 01a Articolo in rivista
rivista: PROTEINS (John Wiley & Sons Incorporated:Customer Service, 111 River Street:Hoboken, NJ 07030:(800)225-5945, (201)748-6000, EMAIL: societyinfo@wiley.com, INTERNET: http://www.wiley.com, Fax: (212)748-6551) pp. 236-249 - issn: 0887-3585 - wos: WOS:000174713400014 (136) - scopus: 2-s2.0-0036568335 (141)

11573/212099 - 2002 - The substrate specificity of the syringomycin synthetase adenylation domains
P., Giovannini; Pascarella, Stefano; Grgurina, Ingeborg - 04d Abstract in atti di convegno
congresso: 6th International Conference on Pseudomonas syringae Pathovars and Related Pathogens (Acquafredda di Maratea (PZ) taly)
libro: 6th International Conference on Pseudomonas syringae Pathovars and Related Pathogens - ()

11573/416176 - 2002 - "In silico" studies of the substrate specificity of the adenylation domains of syringomycin synthetase
P., Giovannini; Pascarella, Stefano; Grgurina, Ingeborg - 04d Abstract in atti di convegno
congresso: 23rd IUPAC International Symposium on the Chemistry of Natural Products (Firenze)
libro: 23rd IUPAC International Symposium on the Chemistry of Natural Products - ()

11573/425093 - 2002 - "In silico" studies of the substrate specificity of the adenylation domains of syringomycin synthetase
P., Giovannini; Pascarella, Stefano; Grgurina, Ingeborg - 04d Abstract in atti di convegno
congresso: 23rd international Symposium on the Chemistry of Natural Products (FLORENCE, ITALY)

11573/1306916 - 2001 - L-threonine aldolase, serine hydroxymethyltransferase and fungal alanine racemase: structural diversity and uniformity in a subgroup of closely related enzymes catalysing different reactions
Contestabile, R.; Paiardini, A.; Pascarella, S.; Bossa, F. - 04c Atto di convegno in rivista
rivista: PROTEIN SCIENCE (Cambridge University Press / New York:40 West 20th Street:New York, NY 10011:(800)872-7423, (212)924-3900, EMAIL: journals_subscriptions@cup.org, INTERNET: http://www.journals.cambridge.org, Fax: (212)691-3239) pp. 145-145 - issn: 0961-8368 - wos: (0) - scopus: (0)
congresso: Fourth European Symposium of the Protein society (Parigi)

11573/248895 - 2001 - L-Threonine aldolase, serine hydroxymethyltransferase and fungal alanine racemase. A subsgroup of strictly related enzymes specialized for different functions
Contestabile, Roberto; Paiardini, Alessandro; Pascarella, Stefano; Di Salvo, Martino Luigi; D'aguanno, Simona; Bossa, Francesco - 01a Articolo in rivista
rivista: EUROPEAN JOURNAL OF BIOCHEMISTRY (Blackwell Science Limited:PO Box 88, Oxford OX2 0NE United Kingdom:011 44 1865 776868, 011 44 1865 206038, EMAIL: journals.cs@blacksci.co.uk, INTERNET: http://www.blackwell-science.com, Fax: 011 44 1865 721205) pp. 6508-6525 - issn: 0014-2956 - wos: WOS:000172788400020 (79) - scopus: 2-s2.0-0035666383 (85)

11573/68483 - 2001 - Selective inhibition of human mast cell tryptase by gabexate mesylate, an antiproteinase drug
Fulvio, Erba; Laura, Fiorucci; Pascarella, Stefano; Enea, Menegatti; Paolo, Ascenzi; Franca, Ascoli - 01a Articolo in rivista
rivista: BIOCHEMICAL PHARMACOLOGY (-Oxford, United Kingdom: Elsevier Science Limited -London ; New York : Pergamon Press, 1958-) pp. 271-276 - issn: 0006-2952 - wos: WOS:000166841200002 (38) - scopus: 2-s2.0-0035253833 (38)

11573/68482 - 2001 - Structural adaptation of enzymes to low temperatures
Gianese, Giulio; Argos, P; Pascarella, Stefano - 01a Articolo in rivista
rivista: PROTEIN ENGINEERING (Oxford University Press:Journals Department, Great Clarendon Street, Oxford OX2 6DP United Kingdom:011 44 1865 556767, EMAIL: jnlorders@oup.co.uk, INTERNET: http://www.oup.co.uk, Fax: 011 44 1865 267485) pp. 141-148 - issn: 0269-2139 - wos: WOS:000168896000001 (89) - scopus: 2-s2.0-0034997442 (105)

11573/399998 - 2001 - Structural adaptation of serine hydroxymethyltransferase to extreme environments
Paiardini, Alessandro; Pascarella, Stefano; Bossa, Francesco - 04d Abstract in atti di convegno
congresso: 4th International Conference on Molecular Structural Biology (Vienna)
libro: Proceeding of the 4th International Conference on Molecular Structural Biology - (9783900554323)

11573/399993 - 2001 - Structural adaptation of enzymes to low temperatures
Pascarella, Stefano; Gianese, Giulio - 04c Atto di convegno in rivista
rivista: PROTEIN SCIENCE (Cambridge University Press / New York:40 West 20th Street:New York, NY 10011:(800)872-7423, (212)924-3900, EMAIL: journals_subscriptions@cup.org, INTERNET: http://www.journals.cambridge.org, Fax: (212)691-3239) pp. 142-142 - issn: 0961-8368 - wos: (0) - scopus: (0)
congresso: Fourth European Symposium of the Protein Society (Parigi)
libro: Fourth European Symposium of the Protein Society - ()

11573/68485 - 2000 - Aspartate aminotransferase from the antarctic bacterium Pseudoalteromonas haloplanktis TAC 125. Cloning, expression, properties, and molecular modelling
Birolo, L; Tutino, Ml; Fontanella, B; Gerday, C; Mainolfi, K; Pascarella, Stefano; Sannia, G; Vinci, F; Marino, G. - 01a Articolo in rivista
rivista: EUROPEAN JOURNAL OF BIOCHEMISTRY (Blackwell Science Limited:PO Box 88, Oxford OX2 0NE United Kingdom:011 44 1865 776868, 011 44 1865 206038, EMAIL: journals.cs@blacksci.co.uk, INTERNET: http://www.blackwell-science.com, Fax: 011 44 1865 721205) pp. 1-14 - issn: 0014-2956 - wos: WOS:000087108400038 (66) - scopus: 2-s2.0-0008298889 (74)

11573/1307035 - 2000 - ADATTAMENTO STRUTTURALE DEGLI ENZIMI ALLE BASSE TEMPERATURE
Gianese, Giulio; Argos, Patrick; Pascarella, Stefano - 04c Atto di convegno in rivista
rivista: ITALIAN JOURNAL OF BIOCHEMISTRY (Il Pensiero Scientifico) pp. 19-19 - issn: 0021-2938 - wos: (0) - scopus: (0)
congresso: Proteine 2000 (Varese)

11573/254464 - 2000 - Characterization of five new low-molecular-mass trypsin inhibitors from white mustard (Sinapis Alba L.) seed
Ruoppolo, M; Amoresano, A; Pucci, P; Pascarella, Stefano; Polticelli, F; Trovato, Maurizio; Menegatti, E; Ascenzi, P. - 01a Articolo in rivista
rivista: EUROPEAN JOURNAL OF BIOCHEMISTRY (Blackwell Science Limited:PO Box 88, Oxford OX2 0NE United Kingdom:011 44 1865 776868, 011 44 1865 206038, EMAIL: journals.cs@blacksci.co.uk, INTERNET: http://www.blackwell-science.com, Fax: 011 44 1865 721205) pp. 6486-6492 - issn: 0014-2956 - wos: WOS:000089885000021 (17) - scopus: 2-s2.0-0033755866 (21)

11573/112567 - 2000 - Structure-function relationships in sorcin, a member of the penta EF-hand family. Interaction of sorcin fragments with the ryanodine receptor and an E.coli model system
Zamparelli, Carlotta; Ilari, Andrea; Verzili, D.; Giangiacomo, L.; Colotti, G.; Pascarella, Stefano; Chiancone, Emilia - 01a Articolo in rivista
rivista: BIOCHEMISTRY (American Chemical Society:1155 Sixteenth Street Northwest:Washington, DC 20036:(800)227-5558, EMAIL: service@acs.org, INTERNET: http://www.pubs.acs.org, Fax: (614)447-3671) pp. 658-666 - issn: 0006-2960 - wos: WOS:000085013100005 (36) - scopus: 2-s2.0-0034142371 (37)

11573/68548 - 1999 - Characterization of low-mass trypsin inhibitor from oil-rape (Brassica napus var. oleifera)
Ascenzi, Paolo; Ruoppolo, M; Amoresano, A; Pucci, P; Consonni, R; Zetta, L; Pascarella, Stefano; Bortolotti, F; Menegatti, E. - 01a Articolo in rivista
rivista: EUROPEAN JOURNAL OF BIOCHEMISTRY (Blackwell Science Limited:PO Box 88, Oxford OX2 0NE United Kingdom:011 44 1865 776868, 011 44 1865 206038, EMAIL: journals.cs@blacksci.co.uk, INTERNET: http://www.blackwell-science.com, Fax: 011 44 1865 721205) pp. 275-284 - issn: 0014-2956 - wos: WOS:000079657800035 (30) - scopus: 2-s2.0-0343948320 (32)

11573/244113 - 1999 - Homology modeling of the multicopper oxidase Fet3 gives new insights in the mechanism of iron transport in yeast
Bonaccorsi Di Patti, Maria Carmela; Pascarella, Stefano; D., Catalucci; Calabrese, Lilia - 01a Articolo in rivista
rivista: PROTEIN ENGINEERING (Oxford University Press:Journals Department, Great Clarendon Street, Oxford OX2 6DP United Kingdom:011 44 1865 556767, EMAIL: jnlorders@oup.co.uk, INTERNET: http://www.oup.co.uk, Fax: 011 44 1865 267485) pp. 895-897 - issn: 0269-2139 - wos: WOS:000084187200001 (21) - scopus: 2-s2.0-0032732549 (23)

11573/68487 - 1999 - T-knot motif revisited
Polticelli, F; Pascarella, Stefano; Bordo, D; Bolognesi, M; Ascenzi, P. - 01a Articolo in rivista
rivista: BIOLOGICAL CHEMISTRY (Walter de Gruyter and Company:Genthinerstrasse 13, D 10785 Berlin Germany:011 49 30 260050, EMAIL: customerservice@deguyter.de, INTERNET: http://www.degruyter.de/, Fax: 011 49 30 26005338) pp. 1247-1250 - issn: 1431-6730 - wos: WOS:000083611400017 (7) - scopus: 2-s2.0-0032727689 (8)

11573/68549 - 1998 - Leech antihemostatic proteins share the T-knot scaffold, a disulfide-reinforced structural motif
P., Ascenzi; M., Bolognesi; D., Catalucci; Pascarella, Stefano; M., Ruoppolo; M., Rizzi - 01a Articolo in rivista
rivista: BIOLOGICAL CHEMISTRY (Walter de Gruyter and Company:Genthinerstrasse 13, D 10785 Berlin Germany:011 49 30 260050, EMAIL: customerservice@deguyter.de, INTERNET: http://www.degruyter.de/, Fax: 011 49 30 26005338) pp. 1387-1389 - issn: 1431-6730 - wos: WOS:000077432900013 (6) - scopus: 2-s2.0-0031764172 (6)

11573/207773 - 1998 - The Structure of Serine Hydroxymethyltransferase as modelled by Homology and validated by Site Directed Mutagenesis
Pascarella, Stefano; Angelaccio, Sebastiana; Contestabile, Roberto; Delle Fratte, S.; Di Salvo, Martino Luigi; Bossa, Francesco - 04a Atto di comunicazione a congresso
libro: Convegno nazionale "Proteine 98" - ()

11573/242011 - 1998 - The structure of serine hydrxymethyltransferase as modeled by homology and validated by site-directed mutagenesis
Pascarella, Stefano; Angelaccio, Sebastiana; Contestabile, Roberto; Delle Fratte, S; Di Salvo, Martino Luigi; Bossa, Francesco - 01a Articolo in rivista
rivista: PROTEIN SCIENCE (Cambridge University Press / New York:40 West 20th Street:New York, NY 10011:(800)872-7423, (212)924-3900, EMAIL: journals_subscriptions@cup.org, INTERNET: http://www.journals.cambridge.org, Fax: (212)691-3239) pp. 1976-1982 - issn: 0961-8368 - wos: WOS:000075955700013 (8) - scopus: 2-s2.0-0031709347 (8)

11573/1307037 - 1998 - THE STRUCTURE OF SERINE HYDROXYMETHYLTRANSFERASE MODELLED BY HOMOLOGY AND VALIDATED BY SITE DIRECTED MUTAGENESIS
Pascarella, Stefano; Angelaccio, Sebastiana; Contestabile, Roberto; Delle Fratte, Sonia; Di Salvo, Martino Luigi; Bossa, Francesco - 04d Abstract in atti di convegno
rivista: ITALIAN BIOCHEMICAL SOCIETY TRANSACTIONS ("MAF servizi") pp. 73-73 - issn: - wos: (0) - scopus: (0)
congresso: Proteine '98 (Genova)
libro: Italian Biochemical Society Transactions (IBST) - ()

11573/68556 - 1998 - Gli alchimisti del duemila
Pascarella, Stefano; Bossa, Francesco - 01a Articolo in rivista
rivista: SAPERE (Edizioni Dedalo SRL:Casella Postale 362, I 70100 Bari Italy:011 39 080 5311413, EMAIL: info@edizionidedalo.it, INTERNET: http://www.edizionidedalo.it, Fax: 011 39 080 5311414) pp. 10-14 - issn: 0036-4681 - wos: (0) - scopus: (0)

11573/244202 - 1998 - Easy method to predict solvent accessibility from multiple protein sequence alignment
Pascarella, Stefano; De Persio, R; Bossa, Francesco; Argos, P. - 01a Articolo in rivista
rivista: PROTEINS (John Wiley & Sons Incorporated:Customer Service, 111 River Street:Hoboken, NJ 07030:(800)225-5945, (201)748-6000, EMAIL: societyinfo@wiley.com, INTERNET: http://www.wiley.com, Fax: (212)748-6551) pp. 190-199 - issn: 0887-3585 - wos: WOS:000075128700005 (32) - scopus: 2-s2.0-0032147008 (35)

11573/242081 - 1998 - Fast-reacting thiols in rat hemoglobin can intercept damaging species in erythrocytes more efficiently than glutathione
Rossi, R; Barra, Donatella; Bellelli, Andrea; Boumis, Giovanna; Canofeni, S; Di Simplicio, P; Lusini, L; Pascarella, Stefano; Amiconi, Gino - 01a Articolo in rivista
rivista: THE JOURNAL OF BIOLOGICAL CHEMISTRY (American Society for Biochemistry and Molecular Biology:9650 Rockville Pike:Bethesda, MD 20814:(301)530-7145, EMAIL: asbmb@asbmb.faseb.org, INTERNET: http://www.faseb.org/asbmb, Fax: (301)571-1824) pp. 19198-19206 - issn: 0021-9258 - wos: WOS:000074974700074 (63) - scopus: 2-s2.0-0032563123 (64)

11573/246836 - 1997 - Stability of aspartate aminotransferase from Sulfolobus solfataricus
M. I., Arnone; L., Birolo; Pascarella, Stefano; M. V., Cubellis; Bossa, Francesco; G., Sannia; G., Marino - 01a Articolo in rivista
rivista: PROTEIN ENGINEERING (Oxford University Press:Journals Department, Great Clarendon Street, Oxford OX2 6DP United Kingdom:011 44 1865 556767, EMAIL: jnlorders@oup.co.uk, INTERNET: http://www.oup.co.uk, Fax: 011 44 1865 267485) pp. 237-248 - issn: 0269-2139 - wos: WOS:A1997WX73600008 (11) - scopus: 2-s2.0-0030953005 (12)

11573/1307040 - 1997 - PREDICTION OF SOLVENT ACCESSIBILITY STATE USING PROTEIN MULTIPLE SEQUENCE ALIGNMENTS
Pascarella, Stefano; De Persio, Roldano; Bossa, Francesco; Argos, Patrick - 04d Abstract in atti di convegno
rivista: ITALIAN BIOCHEMICAL SOCIETY TRANSACTIONS ("MAF servizi") pp. 98-98 - issn: - wos: (0) - scopus: (0)
congresso: Proteine 97 (Ferrara)
libro: Italian Biochemical Society Transactions (IBST) - (88-86154-15-1)

11573/1307152 - 1996 - Stability of Aspartate aminotransferase from Sulfolobus solfataricus: thermodynamic and molecular modelling analysis
Immacolata Arnone, Maria; Birolo, Leila; Pascarella, Stefano; Vittoria Cubellis, Maria; Bossa, Francesco; Sannia, Giovanni; Marino, Gennaro - 04d Abstract in atti di convegno
congresso: XI convegno nazionale Proteine '96 (Siena)
libro: XI Convegno Nazionale Proteine '96: programma e riassunti - ()

11573/245198 - 1996 - BSTI, a trypsin inhibitor from skin secretion of Bombina bombina related to protease inhibitors of nematodes
Mignogna, Giuseppina; Pascarella, Stefano; Wechselberger, C; Hinterleitner, C; Mollay, G; Amiconi, Gino; Barra, Donatella; Kreil, G. - 01a Articolo in rivista
rivista: PROTEIN SCIENCE (Cambridge University Press / New York:40 West 20th Street:New York, NY 10011:(800)872-7423, (212)924-3900, EMAIL: journals_subscriptions@cup.org, INTERNET: http://www.journals.cambridge.org, Fax: (212)691-3239) pp. 357-362 - issn: 0961-8368 - wos: WOS:A1996TU72400020 (68) - scopus: 2-s2.0-0030063710 (71)

11573/481535 - 1996 - Sequenze di proteine e acidi nucleici
Pascarella, Stefano; Bossa, Francesco - 04b Atto di convegno in volume
congresso: XXII Seminario sulla Evoluzione biologica e i grandi problemi della biologia: molecole ed evoluzione (Roma)
libro: XXII seminario sulla Evoluzione biologica e i grandi problemi della biologia: molecole ed evoluzione - ()

11573/1307023 - 1996 - MOLECULAR MODELLING OF SERINE HYDROXYMETHYLTRANSFERASE FROM ESCHERICHIA COLI
Pascarella, Stefano; Bossa, Francesco; Schirch, Verne - 04d Abstract in atti di convegno
congresso: VII Congress on University and Biotechnology Innovation (Genova)
libro: VII CONGRESS ON UNIVERSITY AND BIOTECHNOLOGY INNOVATION - ()

11573/68554 - 1996 - A databank (3D_ALI) collecting related protein sequences and structures
Pascarella, Stefano; Milpeltz, F; Argos, P. - 01a Articolo in rivista
rivista: PROTEIN ENGINEERING (Oxford University Press:Journals Department, Great Clarendon Street, Oxford OX2 6DP United Kingdom:011 44 1865 556767, EMAIL: jnlorders@oup.co.uk, INTERNET: http://www.oup.co.uk, Fax: 011 44 1865 267485) pp. 249-251 - issn: 0269-2139 - wos: WOS:A1996UN04900001 (12) - scopus: 2-s2.0-0029918306 (13)

11573/384161 - 1995 - Active site model for gamma-aminobutyrate aminotransferase explains substrate specificity and inhibitor reactivities
Toney, Md; Pascarella, Stefano; De Biase, Daniela - 01a Articolo in rivista
rivista: PROTEIN SCIENCE (Cambridge University Press / New York:40 West 20th Street:New York, NY 10011:(800)872-7423, (212)924-3900, EMAIL: journals_subscriptions@cup.org, INTERNET: http://www.journals.cambridge.org, Fax: (212)691-3239) pp. 2366-2374 - issn: 0961-8368 - wos: WOS:A1995TE28700015 (21) - scopus: 2-s2.0-0028783806 (28)

11573/1307106 - 1994 - Serine hydroxymethyltransferase: bioinformatics as a support to site-directed mutagenesis experiments
Delle Fratte, Sonia; Pascarella, Stefano; Angelaccio, Sebastiana; Iurescia, Sandra; Contestabile, Roberto; Bossa, Francesco; Schirch, Verne - 04d Abstract in atti di convegno
congresso: 9th Meeting Vitamin B6 and Carbonyl Catalysys and 3rd Symposium PQQ and Quinoproteins (Capri)
libro: 9th Meeting Vitamin B6 and Carbonyl catalysis: Programme and Abstracts - ()

11573/399801 - 1994 - Quantification of secondary structure prediction improvement using distantly related proteins
J. M., Levin; Pascarella, Stefano; P., Argos; J., Garnier - 02a Capitolo o Articolo
libro: PROTEIN STRUCTURE BY DISTANCE ANALYSIS - (9789051991611)

11573/1307101 - 1994 - Similiarity between PLP/PMP dependent enzymes involved in dideoxy- and deoxyaminosugar biosynthesis and other PLP dependent enzymes
Pascarella, Stefano; Bossa, Francesco - 04d Abstract in atti di convegno
congresso: 9th Meeting Vitamin B6 and Carbonyl Catalysys and 3rd Symposium PQQ and Quinoproteins (Capri)
libro: 9th Meeting Vitamin B6 and Carbonyl catalysis: Programme and Abstracts - ()

11573/384195 - 1994 - Similarity between pyridoxal/pyridoxamine phosphate-dependent enzymes involved in dideoxy and deoxyaminosugar biosynthesis and other pyridoxal phosphate enzymes.
Pascarella, Stefano; Bossa, Francesco - 01a Articolo in rivista
rivista: PROTEIN SCIENCE (Cambridge University Press / New York:40 West 20th Street:New York, NY 10011:(800)872-7423, (212)924-3900, EMAIL: journals_subscriptions@cup.org, INTERNET: http://www.journals.cambridge.org, Fax: (212)691-3239) pp. 701-705 - issn: 0961-8368 - wos: WOS:A1994NG25300018 (14) - scopus: 2-s2.0-0028280498 (13)

11573/398955 - 1994 - Detection of weak structural similarities among PLP dependent enzymes
Pascarella, Stefano; Bossa, Francesco - 04b Atto di convegno in volume
congresso: International meeting on vitamin B6 and carbonyl catalysis (Capri)
libro: Biochemistry of Vitamin B6 and PQQ - (9780817650674; 9783764350673)

11573/384121 - 1994 - CONSERVATION OF AMPHIPATHIC CONFORMATIONS IN MULTIPLE PROTEIN STRUCTURAL ALIGNMENTS
Pascarella, Stefano; Patrick, Argos - 01a Articolo in rivista
rivista: PROTEIN ENGINEERING (Oxford University Press:Journals Department, Great Clarendon Street, Oxford OX2 6DP United Kingdom:011 44 1865 556767, EMAIL: jnlorders@oup.co.uk, INTERNET: http://www.oup.co.uk, Fax: 011 44 1865 267485) pp. 185-193 - issn: 0269-2139 - wos: WOS:A1994MT17700006 (4) - scopus: 2-s2.0-0028174062 (4)

11573/1307062 - 1993 - A BIOINFORMATIC APPROACH TO THE STUDY OF THE MECHANISM OF ACTION OF SERINE HYDROXYMETHYLTRANSFERASE
Angelaccio, Sebastiana; Pascarella, Stefano; Iurescia, Sandra; Delle Fratte, Sonia; Contestabile, Roberto; Bossa, Francesco; Schirch, Verne - 04d Abstract in atti di convegno
congresso: Proteine '93 (Parma)
libro: PROTEIN '93: PROGRAMMI E RIASSUNTI - ()

11573/384122 - 1993 - Quantification of secondary structure prediction improvement using multiple alignments.
J. M., Levin; Pascarella, Stefano; P., Argos; J., Garnier - 01a Articolo in rivista
rivista: PROTEIN ENGINEERING (Oxford University Press:Journals Department, Great Clarendon Street, Oxford OX2 6DP United Kingdom:011 44 1865 556767, EMAIL: jnlorders@oup.co.uk, INTERNET: http://www.oup.co.uk, Fax: 011 44 1865 267485) pp. 849-854 - issn: 0269-2139 - wos: WOS:A1994BA69M00024 (0) - scopus: 2-s2.0-0027489387 (99)

11573/1307985 - 1993 - BIONFORMATICS AS A SUPPORT TO SITE-DIRECTED MUTAGENESIS EXPERIMENTS
Pascarella, Stefano; Angelaccio, Sebastiana; Bossa, Francesco - 04d Abstract in atti di convegno
congresso: IV Congress on University and Biotechnology Innovation (Firenze)
libro: IV CONGRESSON UNIVERSITY AND BIOTECHNOLOGY INNOVATION - ()

11573/384123 - 1993 - Similarity between serine hydroxymethyltransferase and other pyridoxal phosphate-dependent enzymes.
Pascarella, Stefano; V., Schirch; Bossa, Francesco - 01a Articolo in rivista
rivista: FEBS LETTERS (Elsevier BV:PO Box 211, 1000 AE Amsterdam Netherlands:011 31 20 4853757, 011 31 20 4853642, 011 31 20 4853641, EMAIL: nlinfo-f@elsevier.nl, INTERNET: http://www.elsevier.nl, Fax: 011 31 20 4853598) pp. 145-149 - issn: 0014-5793 - wos: WOS:A1993LZ25100030 (30) - scopus: 2-s2.0-0027366667 (30)

11573/114005 - 1992 - Serine hydroxymethyltransferase: origin of substrate specificity
Angelaccio, Sebastiana; Pascarella, Stefano; E., Fattori; Bossa, Francesco; W., Strong; V., Schirch - 01a Articolo in rivista
rivista: BIOCHEMISTRY (American Chemical Society:1155 Sixteenth Street Northwest:Washington, DC 20036:(800)227-5558, EMAIL: service@acs.org, INTERNET: http://www.pubs.acs.org, Fax: (614)447-3671) pp. 155-162 - issn: 0006-2960 - wos: WOS:A1992GZ43800023 (36) - scopus: 2-s2.0-0026507501 (35)

11573/384124 - 1992 - Analysis of insertions/deletions in protein structures.
Pascarella, Stefano; P., Argos - 01a Articolo in rivista
rivista: JOURNAL OF MOLECULAR BIOLOGY (-LONDON, ENGLAND: ACADEMIC PRESS LTD ELSEVIER SCIENCE LTD, -London; New York: Academic Press.) pp. 461-471 - issn: 0022-2836 - wos: WOS:A1992HL81200015 (202) - scopus: 2-s2.0-0026566796 (220)

11573/384125 - 1992 - A data bank merging related protein structures and sequences.
Pascarella, Stefano; P., Argos - 01a Articolo in rivista
rivista: PROTEIN ENGINEERING (Oxford University Press:Journals Department, Great Clarendon Street, Oxford OX2 6DP United Kingdom:011 44 1865 556767, EMAIL: jnlorders@oup.co.uk, INTERNET: http://www.oup.co.uk, Fax: 011 44 1865 267485) pp. 121-137 - issn: 0269-2139 - wos: WOS:A1992HK94200003 (131) - scopus: 2-s2.0-0026511848 (143)

11573/1307049 - 1991 - ANALYSIS OF A DATABASE OF STRUCTURALLY ALIGNED PROTEIN SEQUENCES: INSERTIONS AND DELETIONS
Pascarella, Stefano; Argos, Patrick - 04d Abstract in atti di convegno
congresso: Proteine '91 (Trieste)
libro: PROTEINE '91: PROGRAMMA E RIASSUNTI - ()

11573/472710 - 1991 - The Origin of Substrate and Reaction Specificity In Serine Hydroxymethyltransferase
V., Schirch; Angelaccio, Sebastiana; Pascarella, Stefano; E., Fattori; Bossa, Francesco; W., Strong; K., Shostak; M., Zamora - 04b Atto di convegno in volume
congresso: 8TH INTERNATIONAL SYMP ON VITAMIN B6 AND CARBONYL CATALYSIS (OSAKA, JAPAN)
libro: ENZYMES DEPENDENT ON PYRIDOXAL PHOSPHATE AND OTHER CARBONYL COMPOUNDS AS COFACTORS - (0080408206)

11573/399627 - 1990 - Site-directed mutagenesis in the study of serine hydroxymethyltransferase
E., Fattori; Angelaccio, Sebastiana; Pascarella, Stefano; Bossa, Francesco; Barra, Donatella; V., Schirch - 01a Articolo in rivista
rivista: ATTI DELLA ACCADEMIA NAZIONALE DEI LINCEI. RENDICONTI LINCEI. MATEMATICA E APPLICAZIONI (Zürich : EMS Publishing House Roma: Accademia nazionale dei Lincei) pp. 229-234 - issn: 1720-0768 - wos: (0) - scopus: 2-s2.0-65749311499 (0)

11573/1307052 - 1990 - An 'amplified' protein' structure data base
Pascarella, Stefano; Argos, Patrick - 04d Abstract in atti di convegno
congresso: Computer Applicatoins in Biosciences (Martinsried)
libro: Computer Application in Biosciences: book of abstract - ()

11573/399763 - 1990 - Computational analysis of protein sequencing data
Pascarella, Stefano; Colosimo, Alfredo; Bossa, Francesco - 02a Capitolo o Articolo
libro: Laboratory Methodology in Biochemistry: amino acid analysis and protein sequencing - (9780849344008)

11573/400000 - 1989 - Studies on structure function relationship of serine hydroxymethyltransferase: an approach by site-directed mutagenesis
Angelaccio, Sebastiana; Pascarella, Stefano; E., Fattori; Barra, Donatella; Bossa, Francesco; V., Schirch - 04d Abstract in atti di convegno
congresso: 19th Meeting of the Federation of European Biochemical Societies (Roma)
libro: Abstract Book - 19th meeting of the Federation of European Biochemical Societies - ()

11573/111856 - 1989 - The primary structure of rabbit liver mitochondrial serine hydroxymethyltrasferase
F., Martini; Maras, Bruno; P., Tanci; Angelaccio, Sebastiana; Pascarella, Stefano; Barra, Donatella; Bossa, Francesco; V., Schirch - 01a Articolo in rivista
rivista: THE JOURNAL OF BIOLOGICAL CHEMISTRY (American Society for Biochemistry and Molecular Biology:9650 Rockville Pike:Bethesda, MD 20814:(301)530-7145, EMAIL: asbmb@asbmb.faseb.org, INTERNET: http://www.faseb.org/asbmb, Fax: (301)571-1824) pp. 8509-8519 - issn: 0021-9258 - wos: WOS:A1989U743800017 (39) - scopus: 2-s2.0-0024400636 (35)

11573/384127 - 1989 - PRONET: a microcomputer program for predicting the secondary structure of proteins with a neural network.
Pascarella, Stefano; Bossa, Francesco - 01a Articolo in rivista
rivista: COMPUTER APPLICATIONS IN THE BIOSCIENCES (Oxford University Press:Journals Department, Great Clarendon Street, Oxford OX2 6DP United Kingdom:011 44 1865 556767, EMAIL: jnlorders@oup.co.uk, INTERNET: http://www.oup.co.uk, Fax: 011 44 1865 267485) pp. 319-320 - issn: 0266-7061 - wos: WOS:A1989AZ12600009 (9) - scopus: 2-s2.0-0024387058 (13)

11573/384129 - 1989 - CLEAVAGE: a microcomputer program for predicting signal sequence cleavage sites.
Pascarella, Stefano; Bossa, Francesco - 01a Articolo in rivista
rivista: COMPUTER APPLICATIONS IN THE BIOSCIENCES (Oxford University Press:Journals Department, Great Clarendon Street, Oxford OX2 6DP United Kingdom:011 44 1865 556767, EMAIL: jnlorders@oup.co.uk, INTERNET: http://www.oup.co.uk, Fax: 011 44 1865 267485) pp. 53-54 - issn: 0266-7061 - wos: WOS:A1989T378400009 (2) - scopus: 2-s2.0-0024498377 (5)

11573/1306907 - 1988 - Structural comparison of serine hydroxymethyltransferase isoenzumes from rat liver
Martini, F.; Maras, B.; Angelaccio, S.; Tanci, F.; Pascarella, S.; Barra, D.; Schirch, V.; Bossa, F. - 04d Abstract in atti di convegno
congresso: Proteine 88 (Napoli)
libro: Programma e riassunti del 3° convegno nazoinale Proteine 88 - ()

11573/1307020 - 1988 - ANALISI COMPUTERIZZATA DI SEQUENZE PROTEICHE
Pascarella, S.; Colosimo, A.; Bossa, F. - 04d Abstract in atti di convegno
congresso: 34° Convegno della Società Italiana di Biochimica (Padova)
libro: 34° Congresso della Società Italiana di Biochimica - Riassunti - ()

11573/1306908 - 1988 - STUDIES ON STRUCTURE-FUNCTION RELATIONSHIP OF SERINE HYDROXYMETHYLTRANSFERASE: AN APPROACH BY SITE-DIRECTED MUTAGENESIS
Pascarella, Stefano; Angelaccio, Sebastiana; Barra, Donatella; Bossa, Francesco; Schirch, Verne - 04d Abstract in atti di convegno
congresso: Proteine 88 (Napoli)
libro: RIASSUNTI PROTEINE 88 - ()

11573/1307511 - 1987 - Primary structure studies on serine hydroxymethyltransferase
Barra, Donatella; Martini, Filippo; Angelaccio, Sebastiana; Pascarella, Stefano; Bossa, Francesco; Schirch, Laverne - 02a Capitolo o Articolo
libro: PROTEINS, Structure and Function - ()

11573/399703 - 1987 - Sequence studies on vitamin B6-dependent enzymes: serine hydroxymethyltransferase and glutamate decarboxylase
Bossa, Francesco; F., Martini; Angelaccio, Sebastiana; Pascarella, Stefano; Maras, Bruno; V., Schirch; Simmaco, Maurizio; R. A., John; Barra, Donatella - 04b Atto di convegno in volume
congresso: International Congress on Chemical and Biological Aspects of Vitamin B6 Catalysis (Turku, Finlandia)
libro: Biochemistry of vitamin B6 - (9780817619428; 9783764319427)

11573/113095 - 1987 - The primary structure of rabbit liver cytosolic serine hydroxymethyltrasferase
F., Martini; Angelaccio, Sebastiana; Pascarella, Stefano; Barra, Donatella; Bossa, Francesco; V., Schirch - 01a Articolo in rivista
rivista: THE JOURNAL OF BIOLOGICAL CHEMISTRY (American Society for Biochemistry and Molecular Biology:9650 Rockville Pike:Bethesda, MD 20814:(301)530-7145, EMAIL: asbmb@asbmb.faseb.org, INTERNET: http://www.faseb.org/asbmb, Fax: (301)571-1824) pp. 5499-5509 - issn: 0021-9258 - wos: WOS:A1987H036600012 (49) - scopus: 2-s2.0-0023664358 (43)

11573/384130 - 1987 - PROTEUS: a suite of programs for prediction of structural features of proteins using an Apple IIe.
Pascarella, Stefano; Bossa, Francesco - 01a Articolo in rivista
rivista: COMPUTER APPLICATIONS IN THE BIOSCIENCES (Oxford University Press:Journals Department, Great Clarendon Street, Oxford OX2 6DP United Kingdom:011 44 1865 556767, EMAIL: jnlorders@oup.co.uk, INTERNET: http://www.oup.co.uk, Fax: 011 44 1865 267485) pp. 325-331 - issn: 0266-7061 - wos: WOS:A1987K678400009 (6) - scopus: 2-s2.0-0023450018 (5)

11573/384131 - 1987 - A SIMPLE MICROCOMPUTER PROGRAM FOR PREDICTING THE SECONDARY STRUCTURE OF PROTEINS
Pascarella, Stefano; Bossa, Francesco - 01a Articolo in rivista
rivista: COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE (Elsevier Science Ireland Limited:PO Box 85, Limerick Ireland:011 353 61 709600, 011 353 61 61944, EMAIL: usinfo-f@elsevier.com, INTERNET: http://www.elsevier.com, Fax: 011 353 61 709114) pp. 207-208 - issn: 0169-2607 - wos: WOS:A1987J007500006 (3) - scopus: 2-s2.0-0023165144 (3)

11573/111857 - 1986 - The complete amino acid sequences of cytosolic and mitochondrial aspartate aminotrasferase from horse hearth, and inferences on evolution of the isoenzymes
S., Doonan; F., Martini; Angelaccio, Sebastiana; Pascarella, Stefano; Barra, Donatella; Bossa, Francesco - 01a Articolo in rivista
rivista: JOURNAL OF MOLECULAR EVOLUTION (Springer-Verlag New York Incorporated:175 Fifth Avenue:New York, NY 10010:(212)460-1500, EMAIL: orders@springer-ny.com, INTERNET: http://www.springer-ny.com, Fax: (212)533-3503) pp. 328-335 - issn: 0022-2844 - wos: WOS:A1986F160000008 (30) - scopus: 2-s2.0-0022965529 (22)

11573/111858 - 1985 - The primary structure of mitochondrial aspartate aminotrasferase from human heart
F., Martini; Angelaccio, Sebastiana; Barra, Donatella; Pascarella, Stefano; Maras, Bruno; S., Doonan; Bossa, Francesco - 01a Articolo in rivista
rivista: BIOCHIMICA ET BIOPHYSICA ACTA (Elsevier BV:PO Box 211, 1000 AE Amsterdam Netherlands:011 31 20 4853757, 011 31 20 4853642, 011 31 20 4853641, EMAIL: nlinfo-f@elsevier.nl, INTERNET: http://www.elsevier.nl, Fax: 011 31 20 4853598) pp. 46-51 - issn: 0006-3002 - wos: WOS:A1985AVM8800006 (26) - scopus: 2-s2.0-0022395372 (23)

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