11573/1674348 - 2023 -
Immune-related toxicity and soluble profile in patients affected by solid tumors: a network approach Botticelli, Andrea; Cirillo, Alessio; Pomati, Giulia; Cortesi, Enrico; Rossi, Ernesto; Schinzari, Giovanni; Tortora, Giampaolo; Tomao, Silverio; Fiscon, Giulia; Farina, Lorenzo; Scagnoli, Simone; Pisegna, Simona; Ciurluini, Fabio; Chiavassa, Antonella; Amirhassankhani, Sasan; Ceccarelli, Fulvia; Conti, Fabrizio; Di Filippo, Alessandra; Zizzari, Ilaria Grazia; Napoletano, Chiara; Rughetti, Aurelia; Nuti, Marianna; Mezi, Silvia; Marchetti, Paolo - 01a Articolo in rivista
paper: CANCER IMMUNOLOGY, IMMUNOTHERAPY (Heidelberg; Berlin: Springer) pp. - - issn: 1432-0851 - wos: WOS:000943090400001 (1) - scopus: 2-s2.0-85149261068 (2)
11573/1702302 - 2023 -
A network-based bioinformatic analysis for identifying potential repurposable active molecules in different types of human cancers Brunetti, M.; Paci, P.; Fiscon, G. - 04b Atto di convegno in volume
conference: 2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023 (Istanbul, Turchia)
book: Proceedings - 2023 2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023 - ()
11573/1692563 - 2023 -
Bioinformatics analyses to identify molecular gene signatures associated with breast cancer phenotypes Conte, F.; Fiscon, G.; Paci, P. - 04b Atto di convegno in volume
conference: 8th National Congress of Bioengineering, GNB 2023 (ita)
book: Convegno Nazionale di Bioingegneria - (9788855580113)
11573/1692565 - 2023 -
A network-based algorithm for identifying drug repurposing opportunities for complex diseases Fiscon, G.; Conte, F.; Paci, P. - 04b Atto di convegno in volume
conference: 8th National Congress of Bioengineering, GNB 2023 (Padova)
book: Convegno Nazionale di Bioingegneria - (9788855580113)
11573/1686599 - 2023 -
Circular RNA mediated gene regulation in human breast cancer: A bioinformatics analysis Fiscon, G.; Funari, A.; Paci, P. - 01a Articolo in rivista
paper: PLOS ONE (San Francisco, CA : Public Library of Science) pp. - - issn: 1932-6203 - wos: WOS:001056751200046 (2) - scopus: 2-s2.0-85165925723 (2)
11573/1689340 - 2023 -
The impact of drug–drug Interactions on the toxicity profile of combined treatment with BRAF and MEK Inhibitors in patients with BRAF-mutated metastatic melanoma Mezi, Silvia; Botticelli, Andrea; Scagnoli, Simone; Pomati, Giulia; Fiscon, Giulia; De Galitiis, Federica; Romana Di Pietro, Francesca; Verkhovskaia, Sofia; Amirhassankhani, Sasan; Pisegna, Simona; Gentile, Giovanna; Simmaco, Maurizio; Gohlke, Bjoern; Preissner, Robert; Marchetti, Paolo - 01a Articolo in rivista
paper: CANCERS (Basel: MDPI) pp. - - issn: 2072-6694 - wos: WOS:001075924700001 (0) - scopus: 2-s2.0-85172778786 (0)
11573/1685883 - 2023 -
A network approach to define the predictive role of immune profile on tumor response and toxicity of anti PD-1 single agent immunotherapy in patients with solid tumors Mezi, Silvia; Pomati, Giulia; Fiscon, Giulia; Amirhassankhani, Sasan; Zizzari, Ilaria Grazia; Napoletano, Chiara; Rughetti, Aurelia; Rossi, Ernesto; Schinzari, Giovanni; Tortora, Giampaolo; Lanzetta, Gaetano; D'amati, Giulia; Nuti, Marianna; Santini, Daniele; Botticelli, Andrea - 01a Articolo in rivista
paper: FRONTIERS IN IMMUNOLOGY (Lausanne : Frontiers Research Foundation, 2010-) pp. - - issn: 1664-3224 - wos: WOS:001030189500001 (0) - scopus: 2-s2.0-85165554864 (0)
11573/1686598 - 2023 -
An ontology-based approach for modelling and querying Alzheimer’s disease data Taglino, F.; Cumbo, F.; Antognoli, G.; Arisi, I.; D’Onofrio, M.; Perazzoni, F.; Voyat, R.; Fiscon, G.; Conte, F.; Canevelli, M.; Bruno, G.; Mecocci, P.; Bertolazzi, P. - 01a Articolo in rivista
paper: BMC MEDICAL INFORMATICS AND DECISION MAKING (London: BioMed Central.) pp. 1-15 - issn: 1472-6947 - wos: WOS:001044410100001 (1) - scopus: 2-s2.0-85167371953 (1)
11573/1677782 - 2023 -
A Network of MicroRNAs and mRNAs Involved in Melanosome Maturation and Trafficking Defines the Lower Response of Pigmentable Melanoma Cells to Targeted Therapy Vitiello, M.; Mercatanti, A.; Podda, M. S.; Baldanzi, C.; Prantera, A.; Sarti, S.; Rizzo, M.; Salvetti, A.; Conte, F.; Fiscon, G.; Paci, P.; Poliseno, L. - 01a Articolo in rivista
paper: CANCERS (Basel: MDPI) pp. - - issn: 2072-6694 - wos: WOS:000929310400001 (1) - scopus: 2-s2.0-85147887478 (1)
11573/1699206 - 2023 -
Hepatitis B Virus and microRNAs: A Bioinformatics Approach Zulian, V.; Fiscon, G.; Paci, P.; Garbuglia, A. R. - 01a Articolo in rivista
paper: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (Basel (Matthaeustrasse 11) : Molecular Diversity Preservation International MDPI) pp. - - issn: 1661-6596 - wos: WOS:001130716500001 (0) - scopus: 2-s2.0-85180687476 (0)
11573/1702301 - 2023 -
Overview of bioinformatic tools to study viral infections Zulian, V.; Garbuglia, A. R.; Fiscon, G.; Paci, P. - 04b Atto di convegno in volume
conference: IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023 (Istanbul, Turchia)
book: Proceedings - 2023 2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023 - (979-8-3503-3749-5)
11573/1652368 - 2022 -
Repurposing Histaminergic Drugs in Multiple Sclerosis Amadio, Susanna; Conte, Federica; Esposito, Giorgia; Fiscon, Giulia; Paci, Paola; Volonté, Cinzia - 01a Articolo in rivista
paper: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (Basel: MDPI Center) pp. 1-16 - issn: 1422-0067 - wos: WOS:000808722700001 (3) - scopus: 2-s2.0-85131336481 (4)
11573/1659852 - 2022 -
Network analysis to determine association between immuno-related toxicities and immune soluble profile in patients treated with anti-PD-1 Botticelli, A; Cirillo, A; Pomati, G; Cortesi, E; Rossi, E; Schinzari, G; Tortora, G; Tomao, S; Nuti, M; Fiscon, G; Farina, L; Pisegna, S; Ciurluini, F; Chiavassa, A; Amirhassankhani, S; Di Filippo, A; Zizzari, I; Mezi, S; Marchetti, P - 04f Poster
paper: JOURNAL OF CLINICAL ONCOLOGY (editori attuale:
-American Society of Clinical Oncology. , 330 JOHN CARLYLE ST, STE 300, ALEXANDRIA, USA, VA, 22314
precedente:
-W B Saunders Company:Fulfillment Department, The Curtis Center, Independence Square West:Philadelphia, PA 19106:(800)654-2452, (215)238-7800, EMAIL: wbspcs@harcourt.com, INTERNET: http://elsevierhealth.com, Fax: (215)238-6445) pp. - - issn: 0732-183X - wos: WOS:000863680300776 (0) - scopus: (0)
conference: 2022 ASCO Annual Meeting I (Chicago)
book: Journal of clinical oncology - ()
11573/1660543 - 2022 -
A Transcriptome- and Interactome-Based Analysis Identifies Repurposable Drugs for Human Breast Cancer Subtypes Conte, F.; Sibilio, P.; Fiscon, G.; Paci, P. - 01a Articolo in rivista
paper: SYMMETRY (Basel : Molecular Diversity Preservation International) pp. 2230- - issn: 2073-8994 - wos: WOS:000881575100001 (1) - scopus: 2-s2.0-85141790008 (4)
11573/1628524 - 2022 -
A Comparison of Network-Based Methods for Drug Repurposing along with an Application to Human Complex Diseases Fiscon, Giulia; Conte, Federica; Farina, Lorenzo; Paci, Paola - 01a Articolo in rivista
paper: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (Basel: MDPI Center) pp. 1-15 - issn: 1422-0067 - wos: WOS:000781104900001 (3) - scopus: 2-s2.0-85127201482 (3)
11573/1658346 - 2022 -
Identification of Potential Repurposable Drugs in Alzheimer’s Disease Exploiting a Bioinformatics Analysis Fiscon, Giulia; Sibilio, Pasquale; Funari, Alessio; Conte, Federica; Paci, Paola - 01a Articolo in rivista
paper: JOURNAL OF PERSONALIZED MEDICINE (Basel: MDPI AG, 2011-) pp. - - issn: 2075-4426 - wos: WOS:000873097600001 (1) - scopus: 2-s2.0-85140797311 (4)
11573/1660536 - 2022 -
Genomic and immune approach in platinum refractory HPV-negative head and neck squamous cell carcinoma patients treated with Immunotherapy: a novel combined profile Mezi, Silvia; Pomati, Giulia; Zizzari, Ilaria Grazia; Di Filippo, Alessandra; Cerbelli, Bruna; Cirillo, Alessio; Fiscon, Giulia; Amirhassankhani, Sasan; Valentini, Valentino; De Vincentiis, Marco; Corsi, Alessandro; Di Gioia, Cira Rosaria Tiziana; Tombolini, Vincenzo; Della Rocca, Carlo; Polimeni, Antonella; Nuti, Marianna; Marchetti, Paolo; Botticelli, Andrea - 01a Articolo in rivista
paper: BIOMEDICINES (Basel : MDPI) pp. - - issn: 2227-9059 - wos: WOS:000880889000001 (3) - scopus: 2-s2.0-85141779736 (3)
11573/1630319 - 2022 -
Adjuvant epidermal growth factor receptor (EGFR) tyrosine kinase inhibitors (TKIs) for the treatment of people with resected stage I to III non-small-cell lung cancer and EGFR mutation Occhipinti, M.; Ferrara, R.; Imbimbo, M.; Simeon, V.; Fiscon, G.; Marchal, C.; Skoetz, N.; Viscardi, G. - 01a Articolo in rivista
paper: COCHRANE LIBRARY (First or current publisher [Oxford] : [Update Software], 1998-
Intervening publisher [United States ; Great Britain] : Wiley Interscience) pp. 1-13 - issn: 1465-1858 - wos: (0) - scopus: 2-s2.0-85126653028 (0)
11573/1610414 - 2022 -
SWIMmeR: An R-based software to unveiling crucial nodes in complex biological networks Paci, P.; Fiscon, G. - 01a Articolo in rivista
paper: BIOINFORMATICS (-Oxford : Oxford University Press, 1998-) pp. 586-588 - issn: 1367-4803 - wos: WOS:000743380100051 (8) - scopus: 2-s2.0-85120815403 (11)
11573/1634701 - 2022 -
SPINNAKER: an R-based tool to highlight key RNA interactions in complex biological networks Paci, P.; Fiscon, G. - 01a Articolo in rivista
paper: BMC BIOINFORMATICS ([London]: BioMed Central, [2000]-) pp. 1-13 - issn: 1471-2105 - wos: WOS:000791789600001 (1) - scopus: 2-s2.0-85129714354 (2)
11573/1630776 - 2022 -
Comprehensive network medicine-based drug repositioning via integration of therapeutic efficacy and side effects Paci, P.; Fiscon, G.; Conte, F.; Wang, R. -S.; Handy, D. E.; Farina, L.; Loscalzo, J. - 01a Articolo in rivista
paper: NPJ SYSTEMS BIOLOGY AND APPLICATIONS (London : Nature Partner Journals) pp. - - issn: 2056-7189 - wos: WOS:000784137500001 (9) - scopus: 2-s2.0-85128535246 (9)
11573/1610606 - 2022 -
Polymorphonuclear Myeloid-Derived Suppressor Cells Are Abundant in Peripheral Blood of Cancer Patients and Suppress Natural Killer Cell Anti-Tumor Activity Tumino, N.; Besi, F.; Martini, S.; Di Pace, A. L.; Munari, E.; Quatrini, L.; Pelosi, A.; Fiore, P. F.; Fiscon, G.; Paci, P.; Scordamaglia, F.; Covesnon, M. G.; Bogina, G.; Mingari, M. C.; Moretta, L.; Vacca, P. - 01a Articolo in rivista
paper: FRONTIERS IN IMMUNOLOGY (Lausanne : Frontiers Research Foundation, 2010-) pp. 1-12 - issn: 1664-3224 - wos: WOS:000750661400001 (17) - scopus: 2-s2.0-85123914296 (16)
11573/1586465 - 2021 -
Transcriptomics and metabolomics integration reveals redox-dependent metabolic rewiring in breast cancer cells Bonanomi, M.; Salmistraro, N.; Fiscon, G.; Conte, F.; Paci, P.; Bravata, V.; Forte, G. I.; Volpari, T.; Scorza, M.; Mastroianni, F.; D'errico, S.; Avolio, E.; Piccialli, G.; Colangelo, A. M.; Vanoni, M.; Gaglio, D.; Alberghina, L. - 01a Articolo in rivista
paper: CANCERS (Basel: MDPI) pp. - - issn: 2072-6694 - wos: WOS:000712235600001 (7) - scopus: 2-s2.0-85116768024 (9)
11573/1568587 - 2021 -
An Overview of the computational models dealing with the regulatory ceRNA mechanism and ceRNA deregulation in cancer Conte, F.; Fiscon, G.; Sibilio, P.; Licursi, V.; Paci, P. - 02a Capitolo o Articolo
book: Methods in Molecular Biology - (978-1-0716-1502-7; 978-1-0716-1503-4)
11573/1570715 - 2021 -
Drug Repurposing: A Network-based Approach to Amyotrophic Lateral Sclerosis Fiscon, G.; Conte, F.; Amadio, S.; Volonte, C.; Paci, P. - 01a Articolo in rivista
paper: NEUROTHERAPEUTICS (Orlando, FL: Elsevier, c2007-) pp. 1678-1691 - issn: 1933-7213 - wos: WOS:000650130300001 (19) - scopus: 2-s2.0-85105922924 (24)
11573/1521475 - 2021 -
SAveRUNNER: A network-based algorithm for drug repurposing and its application to COVID-19 Fiscon, G.; Conte, F.; Farina, L.; Paci, P. - 01a Articolo in rivista
paper: PLOS COMPUTATIONAL BIOLOGY (San Francisco, CA : Public Library of Science, [2005]-) pp. - - issn: 1553-734X - wos: WOS:000617972500002 (58) - scopus: 2-s2.0-85102213208 (65)
11573/1540720 - 2021 -
SAveRUNNER: an R-based tool for drug repurposing Fiscon, G.; Paci, P. - 01a Articolo in rivista
paper: BMC BIOINFORMATICS ([London]: BioMed Central, [2000]-) pp. - - issn: 1471-2105 - wos: WOS:000632880100002 (32) - scopus: 2-s2.0-85103179032 (41)
11573/1570702 - 2021 -
Gene network analysis using SWIM reveals interplay between the transcription factor-encoding genes HMGA1, FOXM1, and MYBL2 in triple-negative breast cancer Fiscon, G.; Pegoraro, S.; Conte, F.; Manfioletti, G.; Paci, P. - 01a Articolo in rivista
paper: FEBS LETTERS (Elsevier BV:PO Box 211, 1000 AE Amsterdam Netherlands:011 31 20 4853757, 011 31 20 4853642, 011 31 20 4853641, EMAIL: nlinfo-f@elsevier.nl, INTERNET: http://www.elsevier.nl, Fax: 011 31 20 4853598) pp. 1569-1586 - issn: 0014-5793 - wos: WOS:000644563100001 (12) - scopus: 2-s2.0-85107827962 (12)
11573/1570698 - 2021 -
Assessing the impact of data-driven limitations on tracing and forecasting the outbreak dynamics of COVID-19 Fiscon, G.; Salvadore, F.; Guarrasi, V.; Garbuglia, A. R.; Paci, P. - 01a Articolo in rivista
paper: COMPUTERS IN BIOLOGY AND MEDICINE (Elsevier Science Limited:Oxford Fulfillment Center, PO Box 800, Kidlington Oxford OX5 1DX United Kingdom:011 44 1865 843000, 011 44 1865 843699, EMAIL: asianfo@elsevier.com, tcb@elsevier.co.UK, INTERNET: http://www.elsevier.com, http://www.elsevier.com/locate/shpsa/, Fax: 011 44 1865 843010) pp. 104657- - issn: 0010-4825 - wos: WOS:000687867000002 (7) - scopus: 2-s2.0-85110640723 (8)
11573/1490308 - 2021 -
Gene co-expression in the interactome: moving from correlation toward causation via an integrated approach to disease module discovery Paci, P.; Fiscon, G.; Conte, F.; Wang, R. -S.; Farina, L.; Loscalzo, J. - 01a Articolo in rivista
paper: NPJ SYSTEMS BIOLOGY AND APPLICATIONS (London : Nature Partner Journals) pp. - - issn: 2056-7189 - wos: WOS:000609636500001 (50) - scopus: 2-s2.0-85099969496 (60)
11573/1565163 - 2021 -
The role of FOSL1 in stem-like cell reprogramming processes Pecce, V.; Verrienti, A.; Fiscon, G.; Sponziello, M.; Conte, F.; Abballe, L.; Durante, C.; Farina, L.; Filetti, S.; Paci, P. - 01a Articolo in rivista
paper: SCIENTIFIC REPORTS (London: Springer Nature
London: Nature Publishing Group) pp. 1-11 - issn: 2045-2322 - wos: WOS:000675839600007 (11) - scopus: 2-s2.0-85110912612 (13)
11573/1586459 - 2021 -
Integro-differential approach for modeling the COVID-19 dynamics - Impact of confinement measures in Italy Salvadore, F.; Fiscon, G.; Paci, P. - 01a Articolo in rivista
paper: COMPUTERS IN BIOLOGY AND MEDICINE (Elsevier Science Limited:Oxford Fulfillment Center, PO Box 800, Kidlington Oxford OX5 1DX United Kingdom:011 44 1865 843000, 011 44 1865 843699, EMAIL: asianfo@elsevier.com, tcb@elsevier.co.UK, INTERNET: http://www.elsevier.com, http://www.elsevier.com/locate/shpsa/, Fax: 011 44 1865 843010) pp. - - issn: 0010-4825 - wos: WOS:000734613800005 (4) - scopus: 2-s2.0-85118490834 (5)
11573/1564553 - 2021 -
In silico drug repurposing in COVID-19. A network-based analysis Sibilio, Pasquale; Bini, Simone; Fiscon, Giulia; Sponziello, Marialuisa; Conte, Federica; Pecce, Valeria; Durante, Cosimo; Paci, Paola; Falcone, Rosa; Norata, Giuseppe Danilo; Farina, Lorenzo; Verrienti, Antonella - 01a Articolo in rivista
paper: BIOMÉDECINE & PHARMACOTHÉRAPIE (Paris: Editions Scientifique & Medical Elsevier) pp. 1-10 - issn: 0753-3322 - wos: WOS:000696935100002 (12) - scopus: 2-s2.0-85111776839 (16)
11573/1329897 - 2020 -
A paradigm shift in medicine: a comprehensive review of network-based approaches Conte, F.; Fiscon, G.; Licursi, V.; Bizzarri, D.; D'anto, T.; Farina, L.; Paci, P. - 01g Articolo di rassegna (Review)
paper: BIOCHIMICA ET BIOPHYSICA ACTA. GENE REGULATORY MECHANISMS (Amsterdam-UK : Elsevier) pp. - - issn: 1874-9399 - wos: WOS:000528165200002 (51) - scopus: 2-s2.0-85070199010 (61)
11573/1570717 - 2020 -
Disruption of redox homeostasis for combinatorial drug eefficacy in K-Ras tumors as revealed by metabolic connectivity proling Gaglio, Daniela; Bonanomi, Marcella; Valtorta, Silvia; Bharat, Rohit; Ripamonti, Marilena; Conte, Federica; Fiscon, Giulia; Righi, Nicole; Napodano, Elisabetta; Papa, Federico; Raccagni, Isabella; Parker, Seth J.; Cifola, Ingrid; Camboni, Tania; Paci, Paola; Maria Colangelo, Anna; Vanoni, Marco; Metallo, Christian M.; Maria Moresco, Rosa; Alberghina, Lilia - 01a Articolo in rivista
paper: CANCER & METABOLISM (London, UK: BioMed Central) pp. 1-15 - issn: 2049-3002 - wos: WOS:000576836900001 (9) - scopus: (0)
11573/1454870 - 2020 -
The new paradigm of Network Medicine to analyse breast cancer phenotypes Maria Grimaldi, Anna; Conte, Federica; Pane, Katia; Fiscon, Giulia; Mirabelli, Peppino; Baselice, Simona; Giannatiempo, Rosa; Messina, Francesco; Franzese, Monica; Salvatore, Marco; Paci, Paola; Mariarosaria Incoronato, And - 01a Articolo in rivista
paper: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (Basel: MDPI Center) pp. - - issn: 1422-0067 - wos: WOS:000580205600001 (19) - scopus: 2-s2.0-85090561001 (22)
11573/1365548 - 2020 -
Integrated transcriptomic correlation network analysis identifies COPD molecular determinants Paci, Paola; Fiscon, Giulia; Conte, Federica; Licursi, Valerio; Morrow, Jarrett; Hersh, Craig; Cho, Michael; Castaldi, Peter; Glass, Kimberly; Silverman, Edwin K.; Farina, Lorenzo - 01a Articolo in rivista
paper: SCIENTIFIC REPORTS (London: Springer Nature
London: Nature Publishing Group) pp. - - issn: 2045-2322 - wos: WOS:000551092600001 (27) - scopus: 2-s2.0-85085713157 (31)
11573/1392413 - 2020 -
Prostate cancer screening research can benefit from network medicine: an emerging awareness Panebianco, Valeria; Pecoraro, Martina; Fiscon, Giulia; Paci, Paola; Farina, Lorenzo; Catalano, Carlo - 01a Articolo in rivista
paper: NPJ SYSTEMS BIOLOGY AND APPLICATIONS (London : Nature Partner Journals) pp. - - issn: 2056-7189 - wos: WOS:000531700600001 (15) - scopus: 2-s2.0-85084385544 (18)
11573/1390780 - 2020 -
Molecular networks in Network Medicine: Development and applications Silverman, E. K.; Schmidt, H. H. H. W.; Anastasiadou, E.; Altucci, L.; Angelini, M.; Badimon, L.; Balligand, J. -L.; Benincasa, G.; Capasso, G.; Conte, F.; Di Costanzo, A.; Farina, L.; Fiscon, G.; Gatto, L.; Gentili, M.; Loscalzo, J.; Marchese, C.; Napoli, C.; Paci, P.; Petti, M.; Quackenbush, J.; Tieri, P.; Viggiano, D.; Vilahur, G.; Glass, K.; Baumbach, J. - 01g Articolo di rassegna (Review)
paper: WILEY INTERDISCIPLINARY REVIEWS. SYSTEMS BIOLOGY AND MEDICINE (Hoboken, NJ : John Wiley & Sons) pp. - - issn: 1939-5094 - wos: WOS:000526598700001 (110) - scopus: 2-s2.0-85083637278 (126)
11573/1619226 - 2019 -
Mining clinical and laboratory data of neurodegenerative diseases by Machine Learning: transcriptomic biomarkers Arisi, I; D'onofrio, M; Brandi, R; Sonnessa, M; Campanelli, A; Florio, R; Sposato, V; Malerba, F; Cattaneo, A; Mecocci, P; Bruno, G; Canevelli, M; Tsolaki, M; Pelteki, N; Stocchi, F; Vacca, L; Fiscon, G; Bertolazzi, P - 04b Atto di convegno in volume
conference: 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) (Madrid (Spagna))
book: 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - (978-1-5386-5488-0)
11573/1256896 - 2019 -
BRAF V600E -mutant cancers display a variety of networks by SWIM analysis: prediction of vemurafenib clinical response Falcone, Rosa; Conte, Federica; Fiscon, Giulia; Pecce, Valeria; Sponziello, Marialuisa; Durante, Cosimo; Farina, Lorenzo; Filetti, Sebastiano; Paci, Paola; Verrienti, Antonella - 01a Articolo in rivista
paper: ENDOCRINE (New York, Berlin: Springer
Totowa, NJ: Humana Press Incorporated
Basingstoke : Macmillan, 1994-) pp. 406-413 - issn: 1355-008X - wos: WOS:000468840200023 (28) - scopus: 2-s2.0-85062774724 (29)
11573/1259528 - 2019 -
Identification of Disease-miRNA networks across different cancer types using SWIM Fiscon, Giulia; Conte, Federica; Farina, Lorenzo; Pellegrini, Marco; Russo, Francesco; Paci, Paola - 02a Capitolo o Articolo
book: MicroRNA Target Identication: Methods and Protocols - (978-1-4939-9206-5; 978-1-4939-9207-2)
11573/1330755 - 2019 -
MIENTURNET: An interactive web tool for microRNA-target enrichment and network-based analysis Licursi, V.; Conte, F.; Fiscon, G.; Paci, P. - 01a Articolo in rivista
paper: BMC BIOINFORMATICS ([London]: BioMed Central, [2000]-) pp. 545- - issn: 1471-2105 - wos: WOS:000494652100001 (192) - scopus: 2-s2.0-85074548656 (197)
11573/1619214 - 2018 -
An ontology-based approach to improve data querying and organization of Alzheimer's Disease data Arisi, I.; Bertolazzi, P.; Cappelli, E.; Conte, F.; Cumbo, F.; Fiscon, G.; Sonnessa, M.; Taglino, F. - 04b Atto di convegno in volume
conference: 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018 (Madrid; Spain)
book: 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - (978-1-5386-5488-0)
11573/1379649 - 2018 -
Prediction of response to vemurafenib in BRAF V600E mutant cancers based on a network approach Falcone, R.; Paci, P.; Verrienti, A.; Fiscon, G.; Sponziello, M.; Conte, F.; Pecce, V.; Rosignolo, F.; Grani, G.; Lamartina, L.; Ramundo, V.; Durante, C.; Farina, L.; Filetti, S. - 01a Articolo in rivista
paper: ANNALS OF ONCOLOGY (London; Dordrecht; Boston: Kluwer Academic Publishers) pp. viii667-viii668 - issn: 0923-7534 - wos: WOS:000459277304251 (0) - scopus: (0)
11573/1287522 - 2018 -
Computational identification of specific genes for glioblastoma stem-like cells identity Fiscon, G.; Conte, F.; Licursi, V.; Nasi, S.; Paci, P. - 01a Articolo in rivista
paper: SCIENTIFIC REPORTS (London: Springer Nature
London: Nature Publishing Group) pp. 1-10 - issn: 2045-2322 - wos: WOS:000432339200001 (38) - scopus: 2-s2.0-85047239443 (40)
11573/1619212 - 2018 -
An integrated approach based on EEG signals processing combined with supervised methods to classify Alzheimer's disease patients Fiscon, G.; Weitschek, E.; De Cola, M. C.; Felici, G.; Bertolazzi, P. - 04b Atto di convegno in volume
conference: 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018 (Madrid; Spain)
book: 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - (978-1-5386-5488-0)
11573/1161047 - 2018 -
Network-based approaches to explore complex biological systems towards network medicine Fiscon, Giulia; Conte, Federica; Farina, Lorenzo; Paola, Paci; Paci, Paola - 01g Articolo di rassegna (Review)
paper: GENES (Basel : Molecular Diversity Preservation International) pp. - - issn: 2073-4425 - wos: WOS:000448398700018 (51) - scopus: 2-s2.0-85053058635 (55)
11573/1369822 - 2018 -
SWIM tool application to expression data of glioblastoma stem-like cell lines, corresponding primary tumors and conventional glioma cell lines Fiscon, Giulia; Conte, Federica; Paci, P - 01a Articolo in rivista
paper: BMC BIOINFORMATICS ([London]: BioMed Central, [2000]-) pp. - - issn: 1471-2105 - wos: WOS:000451686100009 (25) - scopus: 2-s2.0-85057561029 (26)
11573/1337232 - 2018 -
Combining EEG signal processing with supervised methods for Alzheimer’s patients classification Fiscon, Giulia; Weitschek, Emanuel; Cialini, Alessio; Felici, Giovanni; Bertolazzi, Paola; De Salvo, Simona; Bramanti, Alessia; Bramanti, Placido; De Cola, Maria Cristina - 01a Articolo in rivista
paper: BMC MEDICAL INFORMATICS AND DECISION MAKING (London: BioMed Central.) pp. 1-10 - issn: 1472-6947 - wos: WOS:000434043800002 (72) - scopus: 2-s2.0-85047904462 (101)
11573/1369717 - 2018 -
Interplay between long non-coding RNAs and microRNAs in cancer Francesco, Russo; Fiscon, Giulia; Conte, Federica; Milena, Rizzo; Paci, P; Marco, Pellegrini - 02a Capitolo o Articolo
book: Computational Cell Biology: Methods and Protocols - (978-1-4939-8617-0; 978-1-4939-8618-7)
11573/944027 - 2017 -
Role of the long non-coding RNA PVT1 in the dysregulation of the ceRNA-ceRNA network in human breast cancer Conte, Federica; Fiscon, Giulia; Chiara, Matteo; Colombo, Teresa; Farina, Lorenzo; Paci, Paola - 01a Articolo in rivista
paper: PLOS ONE (San Francisco, CA : Public Library of Science) pp. 1-22 - issn: 1932-6203 - wos: WOS:000394244300035 (89) - scopus: 2-s2.0-85012253754 (96)
11573/1610416 - 2017 -
TCGA2BED: Extracting, extending, integrating, and querying The Cancer Genome Atlas Cumbo, F.; Fiscon, G.; Ceri, S.; Masseroli, M.; Weitschek, E. - 01a Articolo in rivista
paper: BMC BIOINFORMATICS ([London]: BioMed Central, [2000]-) pp. - - issn: 1471-2105 - wos: WOS:000392147900006 (22) - scopus: 2-s2.0-85008177178 (30)
11573/1619247 - 2017 -
String-matching and alignment algorithms for finding motifs in NGS data Fiscon, G.; Weitschek, E. - 02a Capitolo o Articolo
book: Algorithms for Next-Generation Sequencing Data: Techniques, Approaches, and Applications - (978-3-319-59824-6; 978-3-319-59826-0)
11573/952745 - 2017 -
SWIM: A computational tool to unveiling crucial nodes in complex biological networks Paci, Paola; Colombo, Teresa; Fiscon, Giulia; Gurtner, Aymone; Pavesi, Giulio; Farina, Lorenzo - 01a Articolo in rivista
paper: SCIENTIFIC REPORTS (London: Springer Nature
London: Nature Publishing Group) pp. 44797- - issn: 2045-2322 - wos: WOS:000396891000001 (49) - scopus: 2-s2.0-85016043300 (57)
11573/835681 - 2016 -
Integer programming models for feature selection: new extensions and a randomized solution algorithm Bertolazzi, P.; Felici, Giovanni; Festa, P.; Fiscon, Giulia; Weitschek, E. - 01a Articolo in rivista
paper: EUROPEAN JOURNAL OF OPERATIONAL RESEARCH (Elsevier BV:PO Box 211, 1000 AE Amsterdam Netherlands:011 31 20 4853757, 011 31 20 4853642, 011 31 20 4853641, EMAIL: nlinfo-f@elsevier.nl, INTERNET: http://www.elsevier.nl, Fax: 011 31 20 4853598) pp. 389-399 - issn: 0377-2217 - wos: WOS:000369196400005 (45) - scopus: 2-s2.0-84954025794 (50)
11573/1369711 - 2016 -
Integrated network analysis for studying human lung squamous cell carcinoma Fiscon, G; Conte, F; Colombo, T; Farina, L; Paci, P - 04b Atto di convegno in volume
conference: GNB2016 (Napoli; Italy)
book: Proceeding of GNB2016 2016, section: Bioinformatica - (978-88-941906-0-1)
11573/1369919 - 2016 -
A perspective on the algorithms predicting and evaluating the RNA secondary structure Fiscon, G; Iannello, G; Paci, P - 01a Articolo in rivista
paper: JOURNAL OF GENETICS AND GENOME RESEARCH (Newark, DE : Science Resource Online LLC 2014-) pp. - - issn: 2378-3648 - wos: (0) - scopus: (0)
11573/979954 - 2016 -
MISSEL: a method to identify a large number of small species-specific genomic subsequences and its application to viruses classification Fiscon, Giulia; Weitschek, Emanuel; Cella, Eleonora; Lo Presti, Alessandra; Giovanetti, Marta; Babakir Mina, Muhammed; Ciotti, Marco; Ciccozzi, Massimo; Pierangeli, Alessandra; Bertolazzi, Paola; Felici, Giovanni - 01a Articolo in rivista
paper: BIODATA MINING (London : BioMed Central) pp. 9-38 - issn: 1756-0381 - wos: WOS:000389493000001 (8) - scopus: 2-s2.0-85002061831 (13)
11573/835680 - 2015 -
CAMUR: Knowledge extraction from RNA-seq cancer data through equivalent classification rules Cestarelli, Valerio; Fiscon, Giulia; Felici, Giovanni; Bertolazzi, Paola; Weitschek, Emanuel - 01a Articolo in rivista
paper: BIOINFORMATICS (-Oxford : Oxford University Press, 1998-) pp. 697-704 - issn: 1367-4803 - wos: WOS:000371693900008 (25) - scopus: 2-s2.0-84960110262 (30)
11573/655420 - 2015 -
A new procedure to analyze RNA non-branching structures Fiscon, Giulia; Paci, P.; Colombo, T.; Iannello, G. - 01a Articolo in rivista
paper: CURRENT BIOINFORMATICS (Netherlands, BENTHAM SCIENCE PUBLISHERS) pp. 242-258 - issn: 1574-8936 - wos: WOS:000358786000002 (3) - scopus: 2-s2.0-84938570410 (4)
11573/767376 - 2015 -
MONSTER v1.1: a tool to extract and search for RNA non-branching structures Fiscon, Giulia; Paci, P.; Iannello, G. - 01a Articolo in rivista
paper: BMC GENOMICS (London: BioMed Central, 2000-) pp. S1- - issn: 1471-2164 - wos: WOS:000358164000001 (10) - scopus: 2-s2.0-84942915471 (10)
11573/1619241 - 2015 -
Clustering and Classification Techniques for Gene Expression Profile Pattern Analysis Weitschek, E.; Fiscon, G.; Fustaino, V.; Felici, G.; Bertolazzi, P. - 02a Capitolo o Articolo
book: Pattern Recognition in Computational Molecular Biology. Techniques and Approaches - (9781119078845; 9781118893685)
11573/1252302 - 2015 -
Classifying DNA barcode multi-locus sequences with feature vectors and supervised approaches Weitschek, Emanuel; Fiscon, Giulia; Bertolazzi, Paola; Felici, Giovanni - 04d Abstract in atti di convegno
paper: GENOME (Ottawa: NRC Research Press, National Research Council Canada.) pp. 163-303 - issn: 1480-3321 - wos: WOS:000360861200414 (0) - scopus: (0)
conference: 6th International Barcode of Life Conference / Résumés scientifiques du 6(e) congrès international « Barcode of Life. (University of Guelph, canada)
book: Genome - ()
11573/849627 - 2015 -
GELA:a software tool for the analysis of gene expression data. Weitschek, Emanuel; Fiscon, Giulia; Felici, Giovanni; Bertolazzi, Paola - 04b Atto di convegno in volume
conference: 26th International Workshop on Database and Expert Systems Applications (valencia)
book: Database and Expert Systems Applications - (978-3-319-22852-5)
11573/740613 - 2014 -
Alzheimer’s disease patients classification by using EEG signals processing De Cola, M. C.; Fiscon, Giulia; E., Weitschek; S., De Salvo; G., Felici; P., Bramanti - 04f Poster
conference: Società italiana di neurologia: SIN. XLV CONGRESSO NAZIONALE (Cagliari)
book: neurologia.webposter.eu - ()
11573/655414 - 2014 -
Next generation sequencing reads comparison with an alignment-free distance E., Weitschek; D., Santoni; Fiscon, Giulia; M. C., De Cola; P., Bertolazzi; G., Felici - 01a Articolo in rivista
paper: BMC RESEARCH NOTES (London : BioMed Central) pp. 869-882 - issn: 1756-0500 - wos: (0) - scopus: 2-s2.0-85042249401 (16)
11573/740794 - 2014 -
Analysis of microarray and RNA-sequencing gene expression profiles through clustering and classification techniques E., Weitschek; Fiscon, Giulia; Fustaino, Valentina; G., Felici; P., Bertolazzi - 13a Altro ministeriale
11573/541618 - 2014 -
Supervised DNA Barcode species classification: analysis, comparison and results E., Weitschek; Fiscon, Giulia; G., Felici - 01a Articolo in rivista
paper: BIODATA MINING (London : BioMed Central) pp. ------- - issn: 1756-0381 - wos: WOS:000334375000001 (54) - scopus: 2-s2.0-84899472938 (70)
E., Weitschek; Fiscon, Giulia; G., Felici; P., Bertolazzi - 04d Abstract in atti di convegno
conference: Nettab2014, From structural bioinformatics to integrative systems biology. (Torino)
book: Nettab2014 Workshop, From structural bioinformatics to integrative systems biology. Book of Abstract - ()
11573/655419 - 2014 -
A new greedy randomized procedure for the feature selection problem E., Weitschek; Fiscon, Giulia; P., Bertolazzi; P., Festa; Giovanni, Felici - 04a Atto di comunicazione a congresso
conference: IV EURO WG Conference on Operational Research in Computational Biology, Bioinformatics and Medicine Poznan (Biedrusko, Poznan)
book: IV EURO WG Conference on Operational Research in Computational Biology, Bioinformatics and Medicine - ()
11573/655417 - 2014 -
Alzheimer’s disease patients classification through EEG signals processing Fiscon, Giulia; E., Weitschek; G., Felici; P., Bertolazzi; S., De Salvo; P., Bramante; M. C., De Cola - 04b Atto di convegno in volume
conference: 2014 IEEE SYMPOSIUM SERIES ON COMPUTATIONAL INTELLIGENCE (Orlando, Florida)
book: 2014 IEEE SYMPOSIUM SERIES ON COMPUTATIONAL INTELLIGENCE Proceedings - (978-1-4799-4519-1)
11573/740797 - 2014 -
EEG signals analysis to detect Alzheimer's disease patients. Fiscon, Giulia; E., Weitschek; P., Bertolazzi; De Cola, M. C.; S., De Salvo S; P., Bramanti; G., Felici: - 13a Altro ministeriale
11573/541612 - 2014 -
MONSTER v1.0: a novel procedure to extract and search for RNA non-branching structures Fiscon, Giulia; Paci, P.; Colombo, T.; Iannello, G. - 04f Poster
conference: Eleventh Annual Meeting of the Bioinformatics Italian Society (Università degli studi di Roma la Sapienza)
book: BITS annual meeting 2014 - ()
11573/542067 - 2013 -
SUPERVISED LEARINING MEETS DNA BARCODING SPECIES CLASSIFICATION E., Weitschek; Fiscon, Giulia; G., Felici - 13a Altro ministeriale
11573/539449 - 2013 -
Development of an algorithm to identify RNA secondary structures. Fiscon, Giulia; Paci, P.; Colombo, T.; Iannello, G. - 04f Poster
conference: FEBS workshop on Translating Epigenomes into Function: a Next Generation Challenge for Human Disease (Capri, Italy)
book: FEBS workshop on Translating Epigenomes into Function: a Next Generation Challenge for Human Disease- Abstract Book - ()
11573/542064 - 2013 -
STRUCTURAL ANALYSIS OF LONG NON-CODING RNAs Fiscon, Giulia; Paci, P.; Colombo, T.; Iannello, G. - 13a Altro ministeriale