FRANCESCA ROMANA LIBERATI

Dottoressa di ricerca

ciclo: XXXV


supervisore: Prof. Francesca Cutruzzolà
relatore: Prof. Francesca Cutruzzolà
co-supervisore: Prof. Francesca Cutruzzolà

Titolo della tesi: Riboregulation of human Serine Hydroxymethyltransferase activity in cellular metabolism

In the past, a number of metabolic enzymes were solely recognized for their primary metabolic function, but it is now evident that the vast majority of them are engaged in other activities. These moonlighting traits often involve non-standard interactions with other proteins or nucleic acids. In this context, there are proteins that bind and control the fate of an RNA molecule. Nonetheless, it is essential to acknowledge the presence of a phenomenon known as riboregulation, a mechanism by which RNA molecules can influence the protein to which they bind, hence regulating their enzymatic activity and/or location. In this scenario SHMT proteins offer a paradigmatic example: they have a key role in the One Carbon Metabolism for the control of the redox balance of the cells and production of nucleotides. In the meantime, SHMTs can bind RNA; the RNA-SHMT1 (the cytosolic isoform) interaction not only control RNA translation but also the catalytic activity of the enzyme. Due to the role of SHMT proteins in OCM and the importance of this pathway for highly proliferating cells, the lack of effective inhibitors that block the activity of these enzymes represents a significant problem. The objective of this thesis is to demonstrate that riboregulation of the mitochondrial SHMT2 isoform also occurs, and to propose that the RNA-binding feature of SHMT2 might be utilized to target this protein through the production of an RNA-based inhibitor (iRNA). This research represents a starting point for understanding how metabolic enzymes are riboregulated and provides the proof-of-concept for the development of a unique RNA-based approach to inhibit cancer cell growth, a novel potentially effective tool for patients chemotherapy.

Produzione scientifica

11573/1702420 - 2024 - Beyond the barrier: the immune-inspired pathways of tumor extravasation
Di Russo, S.; Liberati, F. R.; Riva, A.; Di Fonzo, F.; Macone, A.; Giardina, G.; Arese, M.; Rinaldo, S.; Cutruzzola, F.; Paone, A. - 01g Articolo di rassegna (Review)
rivista: CELL COMMUNICATION AND SIGNALING (BioMed Central, London) pp. 104- - issn: 1478-811X - wos: WOS:001160608800001 (5) - scopus: 2-s2.0-85184788152 (6)

11573/1707844 - 2024 - Combined delivery of miR-15/16 through humanized ferritin nanocages for the treatment of chronic lymphocytic leukemia
Liberati, Francesca Romana; Di Russo, Sara; Barolo, Lorenzo; Peruzzi, Giovanna; Farina, Maria Vittoria; Spizzichino, Sharon; Di Fonzo, Federica; Quaglio, Deborah; Pisano, Luca; Botta, Bruno; Giorgi, Alessandra; Boffi, Alberto; Cutruzzola, Francesca; Paone, Alessio; Baiocco, Paola - 01a Articolo in rivista
rivista: PHARMACEUTICS (Basel: MDPI, 2009-) pp. - - issn: 1999-4923 - wos: WOS:001192904500001 (0) - scopus: 2-s2.0-85189008467 (1)

11573/1721744 - 2024 - Merging multi-OMICs with proteome integral solubility alteration unveils antibiotic mode of action
Maity, Ritwik; Zhang, Xuepei; Liberati, Francesca Romana; Rossi, Chiara Scribani; Cutruzzola', Francesca; Rinaldo, Serena; Gaetani, Massimiliano; Aínsa, José Antonio; Sancho, Javier - 01a Articolo in rivista
rivista: ELIFE (Cambridge: eLife Sciences Publications) pp. - - issn: 2050-084X - wos: (0) - scopus: 2-s2.0-85205151759 (0)

11573/1714195 - 2024 - Structure-based mechanism of riboregulation of the metabolic enzyme SHMT1
Spizzichino, Sharon; Di Fonzo, Federica; Marabelli, Chiara; Tramonti, Angela; Chaves-Sanjuan, Antonio; Parroni, Alessia; Boumis, Giovanna; Liberati, Francesca Romana; Paone, Alessio; Montemiglio, Linda Celeste; Ardini, Matteo; Jakobi, Arjen J.; Bharadwaj, Alok; Swuec, Paolo; Tartaglia, Gian Gaetano; Paiardini, Alessandro; Contestabile, Roberto; Mai, Antonello; Rotili, Dante; Fiorentino, Francesco; Macone, Alberto; Giorgi, Alessandra; Tria, Giancarlo; Rinaldo, Serena; Bolognesi, Martino; Giardina, Giorgio; Cutruzzola, Francesca - 01a Articolo in rivista
rivista: MOLECULAR CELL (Cell Press:1100 Massachusetts Avenue:Cambridge, MA 02138:(617)661-7057, EMAIL: subs@cell.com, INTERNET: http://www.cellpress.com, Fax: (617)397-2850) pp. 2682-2697 - issn: 1097-2765 - wos: WOS:001281962900001 (0) - scopus: 2-s2.0-85198588581 (0)

11573/1680491 - 2023 - Targeting the Grb2 cSH3 domain: design, synthesis and biological evaluation of the first series of modulators
Bufano, Marianna; Puxeddu, Michela; Nalli, Marianna; La Regina, Giuseppe; Toto, Angelo; Liberati, Francesca Romana; Paone, Alessio; Cutruzzolà, Francesca; Masci, Domiziana; Bigogno, Chiara; Dondio, Giulio; Silvestri, Romano; Gianni, Stefano; Coluccia, Antonio - 01a Articolo in rivista
rivista: BIOORGANIC CHEMISTRY (Academic Press Incorporated:6277 Sea Harbor Drive:Orlando, FL 32887:(800)543-9534, (407)345-4100, EMAIL: ap@acad.com, INTERNET: http://www.idealibrary.com, Fax: (407)352-3445) pp. 106607- - issn: 0045-2068 - wos: WOS:001007153500001 (2) - scopus: 2-s2.0-85159597372 (2)

11573/1584599 - 2022 - Cytosolic localization and in vitro assembly of human de novo thymidylate synthesis complex
Spizzichino, Sharon; Boi, Dalila; Boumis, Giovanna; Lucchi, Roberta; Liberati, Francesca Romana; Capelli, Davide; Montanari, Roberta; Pochetti, Giorgio; Piacentini, Roberta; Parisi, Giacomo; Paone, Alessio; Rinaldo, Serena; Contestabile, Roberto; Tramonti, Angela; Paiardini, Alessandro; Giardina, Giorgio; Cutruzzolà, Francesca - 01a Articolo in rivista
rivista: THE FEBS JOURNAL (Blackwell Pub., Oxford, UK) pp. 1625-1649 - issn: 1742-464X - wos: WOS:000717476400001 (3) - scopus: 2-s2.0-85118844105 (5)

11573/1553790 - 2021 - The emerging role of amino acids of the brain microenvironment in the process of metastasis formation
Cutruzzola', Francesca; Bouzidi, Amani; Liberati, Francesca Romana; Spizzichino, Sharon; Boumis, Giovanna; Macone, Alberto; Rinaldo, Serena; Giardina, Giorgio; Paone, Alessio - 01g Articolo di rassegna (Review)
rivista: CANCERS (Basel: MDPI) pp. - - issn: 2072-6694 - wos: WOS:000666104500001 (4) - scopus: 2-s2.0-85107408621 (5)

11573/1551300 - 2021 - Modelling of SHMT1 riboregulation predicts dynamic changes of serine and glycine levels across cellular compartments
Monti, Michele; Guiducci, Giulia; Paone, Alessio; Rinaldo, Serena; Giardina, Giorgio; Liberati, Francesca Romana; Cutruzzolá, Francesca; Tartaglia, Gian Gaetano - 01a Articolo in rivista
rivista: COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL (Göteborg : Chalmers University of Technology, 2011-) pp. 3034-3041 - issn: 2001-0370 - wos: WOS:000684817100004 (9) - scopus: 2-s2.0-85106619221 (10)

11573/1463758 - 2020 - Cytosolic serine hydroxymethyltransferase controls lung adenocarcinoma cells migratory ability by modulating AMP kinase activity
Bouzidi, Amani; Magnifico, Maria Chiara; Paiardini, Alessandro; Macone, Alberto; Boumis, Giovanna; Giardina, Giorgio; Rinaldo, Serena; Liberati, Francesca Romana; Lauro, Clotilde; Limatola, Cristina; Lanzillotta, Chiara; Tramutola, Antonella; Perluigi, Marzia; Sgarbi, Gianluca; Solaini, Giancarlo; Baracca, Alessandra; Paone, Alessio; Cutruzzolà, Francesca - 01a Articolo in rivista
rivista: CELL DEATH & DISEASE (Nature Group) pp. - - issn: 2041-4889 - wos: WOS:000595956300001 (10) - scopus: 2-s2.0-85096677891 (12)

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